Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 TREX1-205ENST00000625293 1783 ntBASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 BX276092.2-201ENST00000417668 665 ntBASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSMEM1Q8N8F7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 AL121832.2-201ENST00000610979 668 ntBASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 PHGDH-210ENST00000641115 1638 ntBASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.11■□□□□ 0.49
LSMEM1Q8N8F7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.1■□□□□ 0.49
LSMEM1Q8N8F7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 MIPEPP3-201ENST00000412105 444 ntBASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 AC083906.2-201ENST00000511578 360 ntBASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LSMEM1Q8N8F7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms