Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 PRKY-204ENST00000533551 1019 ntBASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 FAM197Y4-202ENST00000622692 608 ntBASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH20Q8N6Y1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 SMG8-203ENST00000578922 2178 ntBASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 AC239809.2-201ENST00000415381 517 ntBASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 UBE2SP1-201ENST00000450587 669 ntBASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 AC133681.1-201ENST00000465482 601 ntBASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 AC066615.1-201ENST00000640911 628 ntBASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH20Q8N6Y1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 AC073314.1-201ENST00000568729 2216 ntBASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 AL023875.1-201ENST00000640777 796 ntBASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PCDH20Q8N6Y1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms