Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC008040.2-201ENST00000461049 708 ntBASIC24.28■■□□□ 1.48
SLX4Q8IY92 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 HLA-A-209ENST00000638375 975 ntBASIC24.28■■□□□ 1.48
SLX4Q8IY92 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 AC004951.3-201ENST00000418645 1148 ntBASIC24.28■■□□□ 1.48
SLX4Q8IY92 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLX4Q8IY92 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 FAM207BP-201ENST00000447172 505 ntBASIC24.27■■□□□ 1.48
SLX4Q8IY92 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 COX11P1-201ENST00000489116 835 ntBASIC24.27■■□□□ 1.48
SLX4Q8IY92 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 AC141257.4-201ENST00000634557 245 ntBASIC24.27■■□□□ 1.48
SLX4Q8IY92 AC136944.6-201ENST00000634818 245 ntBASIC24.27■■□□□ 1.48
SLX4Q8IY92 AC005332.1-201ENST00000577698 1310 ntBASIC24.27■■□□□ 1.48
SLX4Q8IY92 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLX4Q8IY92 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SLX4Q8IY92 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLX4Q8IY92 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 AC083849.1-201ENST00000615227 514 ntBASIC24.26■■□□□ 1.47
SLX4Q8IY92 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 AC093458.2-201ENST00000623150 629 ntBASIC24.26■■□□□ 1.47
SLX4Q8IY92 AC010653.2-201ENST00000623505 997 ntBASIC24.26■■□□□ 1.47
SLX4Q8IY92 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SLX4Q8IY92 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLX4Q8IY92 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.25■■□□□ 1.47
SLX4Q8IY92 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SLX4Q8IY92 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLX4Q8IY92 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLX4Q8IY92 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLX4Q8IY92 TPM4P1-201ENST00000436100 807 ntBASIC24.25■■□□□ 1.47
SLX4Q8IY92 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.25■■□□□ 1.47
SLX4Q8IY92 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.25■■□□□ 1.47
SLX4Q8IY92 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.25■■□□□ 1.47
SLX4Q8IY92 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.25■■□□□ 1.47
SLX4Q8IY92 AL121956.5-201ENST00000625261 221 ntBASIC24.25■■□□□ 1.47
SLX4Q8IY92 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLX4Q8IY92 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLX4Q8IY92 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 CCR12P-201ENST00000446203 998 ntBASIC24.24■■□□□ 1.47
SLX4Q8IY92 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.24■■□□□ 1.47
SLX4Q8IY92 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLX4Q8IY92 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLX4Q8IY92 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLX4Q8IY92 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLX4Q8IY92 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLX4Q8IY92 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLX4Q8IY92 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.24■■□□□ 1.47
SLX4Q8IY92 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms