Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H3Q8IXZ2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 PNMA6B-201ENST00000538162 1200 ntBASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 AC133041.1-202ENST00000642053 222 ntBASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 AC005332.7-201ENST00000614046 2005 ntBASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H3Q8IXZ2 AC092368.3-202ENST00000574180 1591 ntBASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 AC124283.5-201ENST00000624661 1809 ntBASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H3Q8IXZ2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 Z82202.1-201ENST00000623446 1880 ntBASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 RPS2P52-201ENST00000469610 820 ntBASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H3Q8IXZ2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3H3Q8IXZ2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3H3Q8IXZ2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H3Q8IXZ2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms