Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 AC011506.1-201ENST00000474329 610 ntBASIC13.85□□□□□ -0.19
CSMD3Q7Z407 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD3Q7Z407 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 AC092338.2-201ENST00000568827 1415 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 COX11P1-201ENST00000489116 835 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 AL024507.2-201ENST00000606070 2574 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 AC242852.2-201ENST00000615738 1807 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 GUSBP5-202ENST00000510805 1989 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD3Q7Z407 AC246785.2-201ENST00000432512 513 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 AC007663.1-201ENST00000438948 1240 ntBASIC13.84□□□□□ -0.19
CSMD3Q7Z407 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSMD3Q7Z407 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.83□□□□□ -0.19
CSMD3Q7Z407 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.83□□□□□ -0.19
CSMD3Q7Z407 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.83□□□□□ -0.2
CSMD3Q7Z407 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 AC004980.1-204ENST00000429707 299 ntBASIC13.83□□□□□ -0.2
CSMD3Q7Z407 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 AC008040.2-201ENST00000461049 708 ntBASIC13.83□□□□□ -0.2
CSMD3Q7Z407 C1QL1P1-201ENST00000568105 661 ntBASIC13.83□□□□□ -0.2
CSMD3Q7Z407 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSMD3Q7Z407 PCED1CP-201ENST00000419887 785 ntBASIC13.82□□□□□ -0.2
CSMD3Q7Z407 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 AC008622.2-201ENST00000617006 1229 ntBASIC13.82□□□□□ -0.2
CSMD3Q7Z407 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 AL671277.2-201ENST00000458060 996 ntBASIC13.82□□□□□ -0.2
CSMD3Q7Z407 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 GPALPP1-207ENST00000611650 899 ntBASIC13.82□□□□□ -0.2
CSMD3Q7Z407 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 IER3-202ENST00000376377 1350 ntBASIC13.82□□□□□ -0.2
CSMD3Q7Z407 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD3Q7Z407 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms