Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RIF1Q5UIP0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RIF1Q5UIP0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RIF1Q5UIP0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RIF1Q5UIP0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
RIF1Q5UIP0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RIF1Q5UIP0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RIF1Q5UIP0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 AC092329.2-201ENST00000598402 547 ntBASIC19.33■□□□□ 0.68
RIF1Q5UIP0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 AL031008.1-201ENST00000619963 541 ntBASIC19.33■□□□□ 0.68
RIF1Q5UIP0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 HLA-A-201ENST00000376802 1334 ntBASIC19.33■□□□□ 0.68
RIF1Q5UIP0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RIF1Q5UIP0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 MIR1233-2-201ENST00000408138 82 ntBASIC19.32■□□□□ 0.68
RIF1Q5UIP0 MIR1233-1-201ENST00000408722 82 ntBASIC19.32■□□□□ 0.68
RIF1Q5UIP0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 AF228730.7-201ENST00000641842 219 ntBASIC19.32■□□□□ 0.68
RIF1Q5UIP0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIF1Q5UIP0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 AP006587.1-201ENST00000534129 1502 ntBASIC19.31■□□□□ 0.68
RIF1Q5UIP0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 AL139424.1-201ENST00000607572 797 ntBASIC19.31■□□□□ 0.68
RIF1Q5UIP0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.31■□□□□ 0.68
RIF1Q5UIP0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 AC079781.3-201ENST00000449110 356 ntBASIC19.3■□□□□ 0.68
RIF1Q5UIP0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 AL353719.1-201ENST00000566847 864 ntBASIC19.3■□□□□ 0.68
RIF1Q5UIP0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 AC011298.2-201ENST00000617989 482 ntBASIC19.3■□□□□ 0.68
RIF1Q5UIP0 AC131212.4-201ENST00000623606 975 ntBASIC19.3■□□□□ 0.68
RIF1Q5UIP0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 MIR574-201ENST00000385209 96 ntBASIC19.3■□□□□ 0.68
RIF1Q5UIP0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIF1Q5UIP0 HBZP1-201ENST00000354915 429 ntBASIC19.29■□□□□ 0.68
RIF1Q5UIP0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 AP000523.1-201ENST00000398242 1049 ntBASIC19.29■□□□□ 0.68
RIF1Q5UIP0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.29■□□□□ 0.68
RIF1Q5UIP0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms