Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTSL3PQ5NE16 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTSL3PQ5NE16 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 RPS2P52-201ENST00000469610 820 ntBASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTSL3PQ5NE16 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.52■□□□□ 0.71
CTSL3PQ5NE16 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CTSL3PQ5NE16 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CTSL3PQ5NE16 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTSL3PQ5NE16 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 SOX15-203ENST00000570788 1093 ntBASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTSL3PQ5NE16 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 TFP1-202ENST00000475455 1573 ntBASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTSL3PQ5NE16 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSL3PQ5NE16 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.49■□□□□ 0.71
CTSL3PQ5NE16 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTSL3PQ5NE16 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTSL3PQ5NE16 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSL3PQ5NE16 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTSL3PQ5NE16 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms