Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN20Q4JDL3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 UNC93B4-201ENST00000505679 747 ntBASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 AC008687.6-201ENST00000596318 630 ntBASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 AC120498.8-201ENST00000614275 531 ntBASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN20Q4JDL3 AL158211.5-201ENST00000623583 2518 ntBASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 AC008403.3-201ENST00000598924 454 ntBASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN20Q4JDL3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 TFP1-202ENST00000475455 1573 ntBASIC20.84■□□□□ 0.93
PTPN20Q4JDL3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 TREX1-205ENST00000625293 1783 ntBASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms