Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CACNA1EQ15878 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 AC116351.2-201ENST00000606540 1585 ntBASIC19.36■□□□□ 0.69
CACNA1EQ15878 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 EGLN1P1-201ENST00000531623 762 ntBASIC19.36■□□□□ 0.69
CACNA1EQ15878 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 YBX1P2-201ENST00000489612 999 ntBASIC19.36■□□□□ 0.69
CACNA1EQ15878 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.36■□□□□ 0.69
CACNA1EQ15878 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1EQ15878 RCC2P6-201ENST00000526625 1557 ntBASIC19.36■□□□□ 0.69
CACNA1EQ15878 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.35■□□□□ 0.69
CACNA1EQ15878 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 AC007663.1-201ENST00000438948 1240 ntBASIC19.35■□□□□ 0.69
CACNA1EQ15878 ATP5G1P1-201ENST00000448724 379 ntBASIC19.35■□□□□ 0.69
CACNA1EQ15878 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.35■□□□□ 0.69
CACNA1EQ15878 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1EQ15878 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1EQ15878 PLK5-205ENST00000642079 1969 ntBASIC19.34■□□□□ 0.69
CACNA1EQ15878 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 AC117947.1-201ENST00000427448 529 ntBASIC19.34■□□□□ 0.69
CACNA1EQ15878 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 AF106564.1-201ENST00000607058 2553 ntBASIC19.34■□□□□ 0.69
CACNA1EQ15878 AC121338.2-201ENST00000622535 1744 ntBASIC19.34■□□□□ 0.69
CACNA1EQ15878 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 AL031133.1-201ENST00000406807 723 ntBASIC19.34■□□□□ 0.69
CACNA1EQ15878 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1EQ15878 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1EQ15878 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.33■□□□□ 0.69
CACNA1EQ15878 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.33■□□□□ 0.69
CACNA1EQ15878 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CACNA1EQ15878 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1EQ15878 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1EQ15878 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1EQ15878 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1EQ15878 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CACNA1EQ15878 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CACNA1EQ15878 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.33■□□□□ 0.68
CACNA1EQ15878 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA1EQ15878 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CACNA1EQ15878 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.33■□□□□ 0.68
CACNA1EQ15878 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.33■□□□□ 0.68
CACNA1EQ15878 KRT18P16-201ENST00000510337 1294 ntBASIC19.33■□□□□ 0.68
CACNA1EQ15878 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
CACNA1EQ15878 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms