Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
USP46P62068 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP46P62068 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.84■□□□□ 0.93
USP46P62068 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
USP46P62068 AC012618.2-201ENST00000428058 849 ntBASIC20.84■□□□□ 0.93
USP46P62068 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.84■□□□□ 0.93
USP46P62068 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.84■□□□□ 0.93
USP46P62068 MIR4497-201ENST00000583208 89 ntBASIC20.84■□□□□ 0.93
USP46P62068 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP46P62068 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP46P62068 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.84■□□□□ 0.93
USP46P62068 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP46P62068 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.84■□□□□ 0.93
USP46P62068 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.83■□□□□ 0.93
USP46P62068 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP46P62068 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP46P62068 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
USP46P62068 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP46P62068 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
USP46P62068 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP46P62068 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.83■□□□□ 0.93
USP46P62068 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
USP46P62068 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP46P62068 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.83■□□□□ 0.92
USP46P62068 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
USP46P62068 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP46P62068 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP46P62068 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP46P62068 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USP46P62068 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 KRT16P6-202ENST00000425692 1426 ntBASIC20.82■□□□□ 0.92
USP46P62068 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 RARRES2P10-201ENST00000564312 460 ntBASIC20.82■□□□□ 0.92
USP46P62068 AP005212.1-201ENST00000581547 1997 ntBASIC20.82■□□□□ 0.92
USP46P62068 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
USP46P62068 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP46P62068 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.82■□□□□ 0.92
USP46P62068 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
USP46P62068 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
USP46P62068 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
USP46P62068 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.81■□□□□ 0.92
USP46P62068 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USP46P62068 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
USP46P62068 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USP46P62068 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 TSPY7P-201ENST00000431358 1114 ntBASIC20.81■□□□□ 0.92
USP46P62068 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 KRT16P5-201ENST00000455284 522 ntBASIC20.81■□□□□ 0.92
USP46P62068 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USP46P62068 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.81■□□□□ 0.92
USP46P62068 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.81■□□□□ 0.92
USP46P62068 AL049637.2-201ENST00000641778 930 ntBASIC20.81■□□□□ 0.92
USP46P62068 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
USP46P62068 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.81■□□□□ 0.92
USP46P62068 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP46P62068 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
USP46P62068 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
USP46P62068 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.8■□□□□ 0.92
USP46P62068 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 AL512408.1-201ENST00000569378 2000 ntBASIC20.8■□□□□ 0.92
USP46P62068 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 FEM1AP1-201ENST00000431297 1995 ntBASIC20.8■□□□□ 0.92
USP46P62068 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
USP46P62068 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
USP46P62068 AC113410.3-201ENST00000623366 203 ntBASIC20.8■□□□□ 0.92
USP46P62068 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP46P62068 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms