Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.23■□□□□ 0.51
SMIM11AP58511 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SMIM11AP58511 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.23■□□□□ 0.51
SMIM11AP58511 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 HLA-G-202ENST00000376815 851 ntBASIC18.23■□□□□ 0.51
SMIM11AP58511 HLA-G-203ENST00000376818 1127 ntBASIC18.23■□□□□ 0.51
SMIM11AP58511 MCRIP2P1-201ENST00000394346 511 ntBASIC18.23■□□□□ 0.51
SMIM11AP58511 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.23■□□□□ 0.51
SMIM11AP58511 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SMIM11AP58511 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM11AP58511 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.22■□□□□ 0.51
SMIM11AP58511 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.22■□□□□ 0.51
SMIM11AP58511 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.22■□□□□ 0.51
SMIM11AP58511 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SMIM11AP58511 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.22■□□□□ 0.51
SMIM11AP58511 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.22■□□□□ 0.51
SMIM11AP58511 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.22■□□□□ 0.51
SMIM11AP58511 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMIM11AP58511 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMIM11AP58511 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM11AP58511 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SMIM11AP58511 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SMIM11AP58511 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 MIR638-201ENST00000385237 100 ntBASIC18.21■□□□□ 0.51
SMIM11AP58511 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.21■□□□□ 0.51
SMIM11AP58511 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.21■□□□□ 0.51
SMIM11AP58511 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.21■□□□□ 0.51
SMIM11AP58511 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.21■□□□□ 0.51
SMIM11AP58511 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMIM11AP58511 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.21■□□□□ 0.51
SMIM11AP58511 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SMIM11AP58511 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.21■□□□□ 0.51
SMIM11AP58511 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM11AP58511 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.21■□□□□ 0.5
SMIM11AP58511 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMIM11AP58511 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.5
SMIM11AP58511 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMIM11AP58511 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMIM11AP58511 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 KRT18P11-201ENST00000435214 1283 ntBASIC18.2■□□□□ 0.5
SMIM11AP58511 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.2■□□□□ 0.5
SMIM11AP58511 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.2■□□□□ 0.5
SMIM11AP58511 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.2■□□□□ 0.5
SMIM11AP58511 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.2■□□□□ 0.5
SMIM11AP58511 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMIM11AP58511 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.2■□□□□ 0.5
SMIM11AP58511 BCL2-203ENST00000589955 5011 ntBASIC18.2■□□□□ 0.5
SMIM11AP58511 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM11AP58511 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMIM11AP58511 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.19■□□□□ 0.5
SMIM11AP58511 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM11AP58511 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms