Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MTDHP1-201ENST00000605323 784 ntBASIC18.28■□□□□ 0.52
PER3P56645 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PER3P56645 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.28■□□□□ 0.52
PER3P56645 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PER3P56645 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.28■□□□□ 0.52
PER3P56645 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
PER3P56645 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.27■□□□□ 0.52
PER3P56645 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PER3P56645 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.27■□□□□ 0.52
PER3P56645 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PER3P56645 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PER3P56645 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.27■□□□□ 0.52
PER3P56645 PGM5P4-201ENST00000421970 445 ntBASIC18.27■□□□□ 0.52
PER3P56645 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.27■□□□□ 0.52
PER3P56645 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.27■□□□□ 0.52
PER3P56645 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PER3P56645 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.27■□□□□ 0.52
PER3P56645 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.27■□□□□ 0.52
PER3P56645 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.27■□□□□ 0.52
PER3P56645 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PER3P56645 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.27■□□□□ 0.52
PER3P56645 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
PER3P56645 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PER3P56645 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.27■□□□□ 0.51
PER3P56645 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.27■□□□□ 0.51
PER3P56645 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
PER3P56645 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PER3P56645 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.26■□□□□ 0.51
PER3P56645 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.26■□□□□ 0.51
PER3P56645 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PER3P56645 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.26■□□□□ 0.51
PER3P56645 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.26■□□□□ 0.51
PER3P56645 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.26■□□□□ 0.51
PER3P56645 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.26■□□□□ 0.51
PER3P56645 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PER3P56645 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PER3P56645 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.26■□□□□ 0.51
PER3P56645 AL023875.1-201ENST00000640777 796 ntBASIC18.26■□□□□ 0.51
PER3P56645 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PER3P56645 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.26■□□□□ 0.51
PER3P56645 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.26■□□□□ 0.51
PER3P56645 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PER3P56645 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.25■□□□□ 0.51
PER3P56645 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.25■□□□□ 0.51
PER3P56645 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.25■□□□□ 0.51
PER3P56645 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 AC244015.2-201ENST00000616358 1861 ntBASIC18.25■□□□□ 0.51
PER3P56645 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PER3P56645 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.25■□□□□ 0.51
PER3P56645 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.25■□□□□ 0.51
PER3P56645 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.25■□□□□ 0.51
PER3P56645 RARRES2P10-201ENST00000564312 460 ntBASIC18.25■□□□□ 0.51
PER3P56645 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.25■□□□□ 0.51
PER3P56645 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.25■□□□□ 0.51
PER3P56645 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PER3P56645 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PER3P56645 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PER3P56645 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms