Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
FOXG1P55316 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FOXG1P55316 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXG1P55316 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
FOXG1P55316 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.39■□□□□ 0.38
FOXG1P55316 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FOXG1P55316 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXG1P55316 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
FOXG1P55316 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXG1P55316 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXG1P55316 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXG1P55316 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXG1P55316 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXG1P55316 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXG1P55316 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXG1P55316 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXG1P55316 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXG1P55316 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXG1P55316 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXG1P55316 FAM197Y4-202ENST00000622692 608 ntBASIC17.39■□□□□ 0.37
FOXG1P55316 AC066615.1-201ENST00000640911 628 ntBASIC17.39■□□□□ 0.37
FOXG1P55316 TFP1-202ENST00000475455 1573 ntBASIC17.39■□□□□ 0.37
FOXG1P55316 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXG1P55316 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
FOXG1P55316 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FOXG1P55316 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.38■□□□□ 0.37
FOXG1P55316 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.38■□□□□ 0.37
FOXG1P55316 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXG1P55316 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.38■□□□□ 0.37
FOXG1P55316 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.38■□□□□ 0.37
FOXG1P55316 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
FOXG1P55316 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.38■□□□□ 0.37
FOXG1P55316 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.38■□□□□ 0.37
FOXG1P55316 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXG1P55316 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXG1P55316 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXG1P55316 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FOXG1P55316 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXG1P55316 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXG1P55316 AC073130.3-201ENST00000624389 2278 ntBASIC17.37■□□□□ 0.37
FOXG1P55316 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FOXG1P55316 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXG1P55316 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXG1P55316 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
FOXG1P55316 AC133681.1-201ENST00000465482 601 ntBASIC17.37■□□□□ 0.37
FOXG1P55316 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXG1P55316 PRKY-204ENST00000533551 1019 ntBASIC17.37■□□□□ 0.37
FOXG1P55316 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.37■□□□□ 0.37
FOXG1P55316 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.37■□□□□ 0.37
FOXG1P55316 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
FOXG1P55316 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXG1P55316 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.37■□□□□ 0.37
FOXG1P55316 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXG1P55316 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXG1P55316 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FOXG1P55316 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
FOXG1P55316 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXG1P55316 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXG1P55316 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FOXG1P55316 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
FOXG1P55316 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
FOXG1P55316 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.36■□□□□ 0.37
FOXG1P55316 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXG1P55316 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXG1P55316 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXG1P55316 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXG1P55316 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FOXG1P55316 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms