Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.71■□□□□ 0.59
NR1H2P55055 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 AC005224.4-201ENST00000583262 1652 ntBASIC18.71■□□□□ 0.59
NR1H2P55055 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NR1H2P55055 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.71■□□□□ 0.59
NR1H2P55055 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.71■□□□□ 0.59
NR1H2P55055 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.71■□□□□ 0.59
NR1H2P55055 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NR1H2P55055 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.71■□□□□ 0.59
NR1H2P55055 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
NR1H2P55055 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NR1H2P55055 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.71■□□□□ 0.59
NR1H2P55055 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.7■□□□□ 0.58
NR1H2P55055 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.7■□□□□ 0.58
NR1H2P55055 HLA-L-209ENST00000420110 1011 ntBASIC18.7■□□□□ 0.58
NR1H2P55055 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.7■□□□□ 0.58
NR1H2P55055 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.7■□□□□ 0.58
NR1H2P55055 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 KRT87P-202ENST00000534226 1464 ntBASIC18.7■□□□□ 0.58
NR1H2P55055 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.7■□□□□ 0.58
NR1H2P55055 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR1H2P55055 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NR1H2P55055 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.69■□□□□ 0.58
NR1H2P55055 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.69■□□□□ 0.58
NR1H2P55055 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.69■□□□□ 0.58
NR1H2P55055 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NR1H2P55055 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.69■□□□□ 0.58
NR1H2P55055 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NR1H2P55055 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NR1H2P55055 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.69■□□□□ 0.58
NR1H2P55055 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NR1H2P55055 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.68■□□□□ 0.58
NR1H2P55055 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
NR1H2P55055 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.68■□□□□ 0.58
NR1H2P55055 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NR1H2P55055 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.68■□□□□ 0.58
NR1H2P55055 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.68■□□□□ 0.58
NR1H2P55055 AC073111.5-205ENST00000641717 521 ntBASIC18.68■□□□□ 0.58
NR1H2P55055 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.68■□□□□ 0.58
NR1H2P55055 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NR1H2P55055 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H2P55055 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NR1H2P55055 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.67■□□□□ 0.58
NR1H2P55055 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms