Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.81■□□□□ 0.92
ATXN1P54253 AC005829.2-201ENST00000571422 1056 ntBASIC20.81■□□□□ 0.92
ATXN1P54253 AC060766.5-201ENST00000590539 871 ntBASIC20.81■□□□□ 0.92
ATXN1P54253 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATXN1P54253 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ATXN1P54253 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
ATXN1P54253 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.81■□□□□ 0.92
ATXN1P54253 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATXN1P54253 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATXN1P54253 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATXN1P54253 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.8■□□□□ 0.92
ATXN1P54253 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.8■□□□□ 0.92
ATXN1P54253 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.8■□□□□ 0.92
ATXN1P54253 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.8■□□□□ 0.92
ATXN1P54253 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATXN1P54253 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.8■□□□□ 0.92
ATXN1P54253 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ATXN1P54253 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN1P54253 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.79■□□□□ 0.92
ATXN1P54253 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.79■□□□□ 0.92
ATXN1P54253 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.79■□□□□ 0.92
ATXN1P54253 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.79■□□□□ 0.92
ATXN1P54253 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ATXN1P54253 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.79■□□□□ 0.92
ATXN1P54253 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN1P54253 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.78■□□□□ 0.92
ATXN1P54253 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
ATXN1P54253 AC124283.5-201ENST00000624661 1809 ntBASIC20.78■□□□□ 0.92
ATXN1P54253 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ATXN1P54253 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ATXN1P54253 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
ATXN1P54253 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.78■□□□□ 0.92
ATXN1P54253 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATXN1P54253 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.78■□□□□ 0.92
ATXN1P54253 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 KRT18P35-201ENST00000510488 1269 ntBASIC20.78■□□□□ 0.92
ATXN1P54253 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.78■□□□□ 0.92
ATXN1P54253 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.78■□□□□ 0.92
ATXN1P54253 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN1P54253 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.78■□□□□ 0.92
ATXN1P54253 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
ATXN1P54253 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.77■□□□□ 0.92
ATXN1P54253 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.77■□□□□ 0.92
ATXN1P54253 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.77■□□□□ 0.92
ATXN1P54253 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN1P54253 SLC25A24-204ENST00000569674 2357 ntBASIC20.77■□□□□ 0.92
ATXN1P54253 ARMC10P1-201ENST00000313754 855 ntBASIC20.77■□□□□ 0.92
ATXN1P54253 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN1P54253 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN1P54253 HLA-G-202ENST00000376815 851 ntBASIC20.77■□□□□ 0.92
ATXN1P54253 HLA-G-203ENST00000376818 1127 ntBASIC20.77■□□□□ 0.92
ATXN1P54253 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.77■□□□□ 0.92
ATXN1P54253 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.77■□□□□ 0.92
ATXN1P54253 RN7SL471P-201ENST00000580476 299 ntBASIC20.77■□□□□ 0.92
ATXN1P54253 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.77■□□□□ 0.92
ATXN1P54253 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN1P54253 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN1P54253 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATXN1P54253 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATXN1P54253 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.76■□□□□ 0.91
ATXN1P54253 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ATXN1P54253 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.76■□□□□ 0.91
ATXN1P54253 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.76■□□□□ 0.91
ATXN1P54253 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.76■□□□□ 0.91
ATXN1P54253 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms