Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LIMK1P53667 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.62■□□□□ 0.73
LIMK1P53667 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LIMK1P53667 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LIMK1P53667 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK1P53667 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK1P53667 AP000550.4-202ENST00000639755 178 ntBASIC19.62■□□□□ 0.73
LIMK1P53667 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LIMK1P53667 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIMK1P53667 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.62■□□□□ 0.73
LIMK1P53667 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
LIMK1P53667 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LIMK1P53667 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.61■□□□□ 0.73
LIMK1P53667 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.61■□□□□ 0.73
LIMK1P53667 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.61■□□□□ 0.73
LIMK1P53667 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 AC128688.1-201ENST00000487626 519 ntBASIC19.61■□□□□ 0.73
LIMK1P53667 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK1P53667 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK1P53667 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LIMK1P53667 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.61■□□□□ 0.73
LIMK1P53667 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
LIMK1P53667 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK1P53667 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.61■□□□□ 0.73
LIMK1P53667 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.61■□□□□ 0.73
LIMK1P53667 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIMK1P53667 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LIMK1P53667 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK1P53667 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK1P53667 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK1P53667 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK1P53667 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LIMK1P53667 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.6■□□□□ 0.73
LIMK1P53667 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LIMK1P53667 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.6■□□□□ 0.73
LIMK1P53667 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.6■□□□□ 0.73
LIMK1P53667 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIMK1P53667 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.6■□□□□ 0.73
LIMK1P53667 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LIMK1P53667 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.59■□□□□ 0.73
LIMK1P53667 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 AL031133.1-201ENST00000406807 723 ntBASIC19.59■□□□□ 0.73
LIMK1P53667 ECEL1P2-202ENST00000465689 757 ntBASIC19.59■□□□□ 0.73
LIMK1P53667 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.59■□□□□ 0.73
LIMK1P53667 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
LIMK1P53667 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.59■□□□□ 0.73
LIMK1P53667 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.59■□□□□ 0.73
LIMK1P53667 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.59■□□□□ 0.73
LIMK1P53667 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LIMK1P53667 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.59■□□□□ 0.73
LIMK1P53667 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LIMK1P53667 FSCN1P1-201ENST00000568912 1481 ntBASIC19.59■□□□□ 0.73
LIMK1P53667 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LIMK1P53667 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LIMK1P53667 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LIMK1P53667 AC244015.2-201ENST00000616358 1861 ntBASIC19.58■□□□□ 0.73
LIMK1P53667 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.58■□□□□ 0.73
LIMK1P53667 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.58■□□□□ 0.73
LIMK1P53667 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LIMK1P53667 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LIMK1P53667 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LIMK1P53667 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK1P53667 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK1P53667 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LIMK1P53667 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms