Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.5■□□□□ 0.55
SMSP52788 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.5■□□□□ 0.55
SMSP52788 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMSP52788 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.5■□□□□ 0.55
SMSP52788 AC245052.3-201ENST00000450182 901 ntBASIC18.5■□□□□ 0.55
SMSP52788 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.5■□□□□ 0.55
SMSP52788 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.5■□□□□ 0.55
SMSP52788 AL589743.5-201ENST00000616611 1050 ntBASIC18.5■□□□□ 0.55
SMSP52788 FAM197Y4-202ENST00000622692 608 ntBASIC18.5■□□□□ 0.55
SMSP52788 HLA-B-256ENST00000639848 1089 ntBASIC18.5■□□□□ 0.55
SMSP52788 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.5■□□□□ 0.55
SMSP52788 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SMSP52788 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SMSP52788 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMSP52788 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.5■□□□□ 0.55
SMSP52788 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.49■□□□□ 0.55
SMSP52788 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SMSP52788 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
SMSP52788 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.49■□□□□ 0.55
SMSP52788 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.49■□□□□ 0.55
SMSP52788 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.49■□□□□ 0.55
SMSP52788 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
SMSP52788 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.49■□□□□ 0.55
SMSP52788 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.49■□□□□ 0.55
SMSP52788 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.49■□□□□ 0.55
SMSP52788 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMSP52788 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SMSP52788 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMSP52788 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 SMG8-203ENST00000578922 2178 ntBASIC18.48■□□□□ 0.55
SMSP52788 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.48■□□□□ 0.55
SMSP52788 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.48■□□□□ 0.55
SMSP52788 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.48■□□□□ 0.55
SMSP52788 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.48■□□□□ 0.55
SMSP52788 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 KRT17P3-201ENST00000420566 1262 ntBASIC18.48■□□□□ 0.55
SMSP52788 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SMSP52788 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 CYP2T3P-201ENST00000601990 817 ntBASIC18.48■□□□□ 0.55
SMSP52788 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.48■□□□□ 0.55
SMSP52788 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.48■□□□□ 0.55
SMSP52788 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMSP52788 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SMSP52788 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.47■□□□□ 0.55
SMSP52788 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 AL359736.2-201ENST00000621992 437 ntBASIC18.47■□□□□ 0.55
SMSP52788 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.47■□□□□ 0.55
SMSP52788 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMSP52788 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms