Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 AL032819.2-201ENST00000624543 2162 ntBASIC18.92■□□□□ 0.62
POLR2JP52435 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
POLR2JP52435 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 MCRIP2P1-201ENST00000394346 511 ntBASIC18.92■□□□□ 0.62
POLR2JP52435 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.92■□□□□ 0.62
POLR2JP52435 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2JP52435 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2JP52435 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2JP52435 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
POLR2JP52435 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
POLR2JP52435 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.91■□□□□ 0.62
POLR2JP52435 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.91■□□□□ 0.62
POLR2JP52435 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.91■□□□□ 0.62
POLR2JP52435 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.91■□□□□ 0.62
POLR2JP52435 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.91■□□□□ 0.62
POLR2JP52435 AC100791.3-201ENST00000617619 330 ntBASIC18.91■□□□□ 0.62
POLR2JP52435 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2JP52435 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
POLR2JP52435 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2JP52435 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
POLR2JP52435 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
POLR2JP52435 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
POLR2JP52435 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR2JP52435 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR2JP52435 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR2JP52435 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
POLR2JP52435 ZNRF2P3-201ENST00000424200 374 ntBASIC18.9■□□□□ 0.62
POLR2JP52435 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
POLR2JP52435 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.9■□□□□ 0.62
POLR2JP52435 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
POLR2JP52435 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
POLR2JP52435 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR2JP52435 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 AC120498.9-201ENST00000339021 3867 ntBASIC18.9■□□□□ 0.62
POLR2JP52435 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2JP52435 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR2JP52435 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
POLR2JP52435 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR2JP52435 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2JP52435 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.89■□□□□ 0.61
POLR2JP52435 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
POLR2JP52435 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2JP52435 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2JP52435 NTF6G-201ENST00000591094 616 ntBASIC18.89■□□□□ 0.61
POLR2JP52435 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2JP52435 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
POLR2JP52435 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR2JP52435 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
POLR2JP52435 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR2JP52435 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2JP52435 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
POLR2JP52435 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2JP52435 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2JP52435 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2JP52435 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2JP52435 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2JP52435 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2JP52435 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2JP52435 RARRES2P4-201ENST00000514074 484 ntBASIC18.88■□□□□ 0.61
POLR2JP52435 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
POLR2JP52435 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms