Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR4P51571 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 TFP1-202ENST00000475455 1573 ntBASIC18.19■□□□□ 0.5
SSR4P51571 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR4P51571 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.19■□□□□ 0.5
SSR4P51571 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSR4P51571 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSR4P51571 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 GABARAPL3-202ENST00000624044 1851 ntBASIC18.19■□□□□ 0.5
SSR4P51571 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SSR4P51571 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR4P51571 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.19■□□□□ 0.5
SSR4P51571 HTR7P1-201ENST00000538670 1336 ntBASIC18.19■□□□□ 0.5
SSR4P51571 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR4P51571 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSR4P51571 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.19■□□□□ 0.5
SSR4P51571 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SSR4P51571 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR4P51571 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.18■□□□□ 0.5
SSR4P51571 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR4P51571 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSR4P51571 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR4P51571 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SSR4P51571 AL353807.1-201ENST00000427475 662 ntBASIC18.18■□□□□ 0.5
SSR4P51571 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR4P51571 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SSR4P51571 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR4P51571 MIR4497-201ENST00000583208 89 ntBASIC18.18■□□□□ 0.5
SSR4P51571 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.18■□□□□ 0.5
SSR4P51571 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR4P51571 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.18■□□□□ 0.5
SSR4P51571 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SSR4P51571 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SSR4P51571 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSR4P51571 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SSR4P51571 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SSR4P51571 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SSR4P51571 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SSR4P51571 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.17■□□□□ 0.5
SSR4P51571 SNORA78-201ENST00000459373 127 ntBASIC18.17■□□□□ 0.5
SSR4P51571 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.17■□□□□ 0.5
SSR4P51571 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SSR4P51571 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.17■□□□□ 0.5
SSR4P51571 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.17■□□□□ 0.5
SSR4P51571 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.17■□□□□ 0.5
SSR4P51571 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.17■□□□□ 0.5
SSR4P51571 AL049637.2-201ENST00000641778 930 ntBASIC18.17■□□□□ 0.5
SSR4P51571 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.17■□□□□ 0.5
SSR4P51571 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSR4P51571 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SSR4P51571 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SSR4P51571 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SSR4P51571 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR4P51571 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.16■□□□□ 0.5
SSR4P51571 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SSR4P51571 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.16■□□□□ 0.5
SSR4P51571 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.16■□□□□ 0.5
SSR4P51571 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.16■□□□□ 0.5
SSR4P51571 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.16■□□□□ 0.5
SSR4P51571 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSR4P51571 AL512408.1-201ENST00000569378 2000 ntBASIC18.16■□□□□ 0.5
SSR4P51571 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSR4P51571 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR4P51571 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR4P51571 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR4P51571 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SSR4P51571 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR4P51571 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSR4P51571 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.15■□□□□ 0.5
SSR4P51571 YBX1P10-201ENST00000444752 975 ntBASIC18.15■□□□□ 0.5
SSR4P51571 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSR4P51571 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.15■□□□□ 0.5
SSR4P51571 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.15■□□□□ 0.5
SSR4P51571 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.15■□□□□ 0.5
SSR4P51571 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms