Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RNF144AP50876 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RNF144AP50876 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF144AP50876 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF144AP50876 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RNF144AP50876 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RNF144AP50876 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF144AP50876 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF144AP50876 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF144AP50876 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF144AP50876 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF144AP50876 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF144AP50876 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF144AP50876 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF144AP50876 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF144AP50876 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF144AP50876 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF144AP50876 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF144AP50876 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF144AP50876 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF144AP50876 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF144AP50876 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF144AP50876 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RNF144AP50876 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF144AP50876 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.36■□□□□ 0.53
RNF144AP50876 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF144AP50876 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF144AP50876 AC091874.3-201ENST00000512672 1195 ntBASIC18.36■□□□□ 0.53
RNF144AP50876 AL031963.3-201ENST00000606441 850 ntBASIC18.36■□□□□ 0.53
RNF144AP50876 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.35■□□□□ 0.53
RNF144AP50876 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 KRT8P20-201ENST00000423953 1409 ntBASIC18.35■□□□□ 0.53
RNF144AP50876 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RNF144AP50876 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF144AP50876 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF144AP50876 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF144AP50876 AC092118.2-201ENST00000613495 667 ntBASIC18.35■□□□□ 0.53
RNF144AP50876 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF144AP50876 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF144AP50876 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF144AP50876 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF144AP50876 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF144AP50876 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF144AP50876 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF144AP50876 AC006557.6-201ENST00000623071 864 ntBASIC18.34■□□□□ 0.53
RNF144AP50876 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF144AP50876 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RNF144AP50876 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms