Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.81■□□□□ 0.6
GABRA4P48169 AF186192.3-201ENST00000583427 947 ntBASIC18.81■□□□□ 0.6
GABRA4P48169 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
GABRA4P48169 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.81■□□□□ 0.6
GABRA4P48169 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.81■□□□□ 0.6
GABRA4P48169 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.81■□□□□ 0.6
GABRA4P48169 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABRA4P48169 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.8■□□□□ 0.6
GABRA4P48169 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GABRA4P48169 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
GABRA4P48169 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
GABRA4P48169 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.8■□□□□ 0.6
GABRA4P48169 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
GABRA4P48169 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.8■□□□□ 0.6
GABRA4P48169 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.8■□□□□ 0.6
GABRA4P48169 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
GABRA4P48169 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.8■□□□□ 0.6
GABRA4P48169 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABRA4P48169 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.8■□□□□ 0.6
GABRA4P48169 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.79■□□□□ 0.6
GABRA4P48169 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
GABRA4P48169 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GABRA4P48169 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.79■□□□□ 0.6
GABRA4P48169 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 TSPY7P-201ENST00000431358 1114 ntBASIC18.79■□□□□ 0.6
GABRA4P48169 YBX1P10-201ENST00000444752 975 ntBASIC18.79■□□□□ 0.6
GABRA4P48169 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.79■□□□□ 0.6
GABRA4P48169 KRT18P16-201ENST00000510337 1294 ntBASIC18.79■□□□□ 0.6
GABRA4P48169 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GABRA4P48169 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GABRA4P48169 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.79■□□□□ 0.6
GABRA4P48169 AP001412.1-201ENST00000608405 714 ntBASIC18.79■□□□□ 0.6
GABRA4P48169 AL353708.3-201ENST00000610272 989 ntBASIC18.79■□□□□ 0.6
GABRA4P48169 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GABRA4P48169 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
GABRA4P48169 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABRA4P48169 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GABRA4P48169 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABRA4P48169 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABRA4P48169 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABRA4P48169 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.78■□□□□ 0.6
GABRA4P48169 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.78■□□□□ 0.6
GABRA4P48169 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABRA4P48169 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABRA4P48169 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.78■□□□□ 0.6
GABRA4P48169 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.78■□□□□ 0.6
GABRA4P48169 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.78■□□□□ 0.6
GABRA4P48169 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
GABRA4P48169 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GABRA4P48169 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GABRA4P48169 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABRA4P48169 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GABRA4P48169 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.77■□□□□ 0.6
GABRA4P48169 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GABRA4P48169 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABRA4P48169 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.77■□□□□ 0.6
GABRA4P48169 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GABRA4P48169 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABRA4P48169 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABRA4P48169 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.77■□□□□ 0.6
GABRA4P48169 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABRA4P48169 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms