Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR4758-201ENST00000577688 71 ntBASIC20.58■□□□□ 0.89
MMP13P45452 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
MMP13P45452 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP13P45452 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP13P45452 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.58■□□□□ 0.89
MMP13P45452 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.58■□□□□ 0.88
MMP13P45452 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP13P45452 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MMP13P45452 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP13P45452 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP13P45452 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MMP13P45452 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP13P45452 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP13P45452 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
MMP13P45452 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP13P45452 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP13P45452 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
MMP13P45452 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP13P45452 C2orf69P4-201ENST00000565394 541 ntBASIC20.57■□□□□ 0.88
MMP13P45452 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
MMP13P45452 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP13P45452 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP13P45452 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
MMP13P45452 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP13P45452 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP13P45452 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.56■□□□□ 0.88
MMP13P45452 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.56■□□□□ 0.88
MMP13P45452 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.56■□□□□ 0.88
MMP13P45452 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MMP13P45452 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MMP13P45452 DUSP5P2-201ENST00000426873 1033 ntBASIC20.56■□□□□ 0.88
MMP13P45452 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.56■□□□□ 0.88
MMP13P45452 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.56■□□□□ 0.88
MMP13P45452 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.56■□□□□ 0.88
MMP13P45452 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP13P45452 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP13P45452 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.56■□□□□ 0.88
MMP13P45452 DPP3P2-201ENST00000416030 1696 ntBASIC20.56■□□□□ 0.88
MMP13P45452 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP13P45452 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
MMP13P45452 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP13P45452 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP13P45452 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP13P45452 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP13P45452 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MMP13P45452 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.55■□□□□ 0.88
MMP13P45452 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.55■□□□□ 0.88
MMP13P45452 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP13P45452 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.55■□□□□ 0.88
MMP13P45452 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MMP13P45452 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP13P45452 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP13P45452 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
MMP13P45452 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP13P45452 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP13P45452 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MMP13P45452 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP13P45452 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 AL355802.2-201ENST00000402069 882 ntBASIC20.54■□□□□ 0.88
MMP13P45452 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MMP13P45452 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP13P45452 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP13P45452 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP13P45452 AC142086.2-201ENST00000569753 217 ntBASIC20.54■□□□□ 0.88
MMP13P45452 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP13P45452 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
MMP13P45452 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP13P45452 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms