Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MTHFRP42898 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
MTHFRP42898 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.76■□□□□ 0.91
MTHFRP42898 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MTHFRP42898 TSPY14P-201ENST00000303979 915 ntBASIC20.76■□□□□ 0.91
MTHFRP42898 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MTHFRP42898 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.76■□□□□ 0.91
MTHFRP42898 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MTHFRP42898 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MTHFRP42898 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MTHFRP42898 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MTHFRP42898 AC128688.1-201ENST00000487626 519 ntBASIC20.76■□□□□ 0.91
MTHFRP42898 LINC01238-205ENST00000567549 1107 ntBASIC20.76■□□□□ 0.91
MTHFRP42898 C1QL1P1-201ENST00000568105 661 ntBASIC20.76■□□□□ 0.91
MTHFRP42898 AL445675.2-201ENST00000620291 557 ntBASIC20.76■□□□□ 0.91
MTHFRP42898 AC006011.2-201ENST00000621313 1158 ntBASIC20.76■□□□□ 0.91
MTHFRP42898 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.76■□□□□ 0.91
MTHFRP42898 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MTHFRP42898 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.75■□□□□ 0.91
MTHFRP42898 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.75■□□□□ 0.91
MTHFRP42898 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.75■□□□□ 0.91
MTHFRP42898 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.75■□□□□ 0.91
MTHFRP42898 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
MTHFRP42898 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MTHFRP42898 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
MTHFRP42898 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.75■□□□□ 0.91
MTHFRP42898 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MTHFRP42898 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MTHFRP42898 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.75■□□□□ 0.91
MTHFRP42898 PTBP1P-201ENST00000554374 1601 ntBASIC20.75■□□□□ 0.91
MTHFRP42898 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
MTHFRP42898 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MTHFRP42898 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MTHFRP42898 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MTHFRP42898 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
MTHFRP42898 MESTP1-201ENST00000404287 994 ntBASIC20.74■□□□□ 0.91
MTHFRP42898 ECEL1P2-202ENST00000465689 757 ntBASIC20.74■□□□□ 0.91
MTHFRP42898 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.74■□□□□ 0.91
MTHFRP42898 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.74■□□□□ 0.91
MTHFRP42898 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MTHFRP42898 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.74■□□□□ 0.91
MTHFRP42898 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MTHFRP42898 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MTHFRP42898 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
MTHFRP42898 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
MTHFRP42898 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.73■□□□□ 0.91
MTHFRP42898 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
MTHFRP42898 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
MTHFRP42898 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
MTHFRP42898 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.73■□□□□ 0.91
MTHFRP42898 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.73■□□□□ 0.91
MTHFRP42898 BX664615.1-201ENST00000443558 458 ntBASIC20.73■□□□□ 0.91
MTHFRP42898 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.73■□□□□ 0.91
MTHFRP42898 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.73■□□□□ 0.91
MTHFRP42898 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.73■□□□□ 0.91
MTHFRP42898 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MTHFRP42898 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MTHFRP42898 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MTHFRP42898 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
MTHFRP42898 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
MTHFRP42898 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MTHFRP42898 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MTHFRP42898 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MTHFRP42898 AK4P3-201ENST00000418260 669 ntBASIC20.72■□□□□ 0.91
MTHFRP42898 B3GAT3P1-201ENST00000471720 806 ntBASIC20.72■□□□□ 0.91
MTHFRP42898 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MTHFRP42898 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.72■□□□□ 0.91
MTHFRP42898 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.72■□□□□ 0.91
MTHFRP42898 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.72■□□□□ 0.91
MTHFRP42898 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
MTHFRP42898 AP006587.1-201ENST00000534129 1502 ntBASIC20.72■□□□□ 0.91
MTHFRP42898 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MTHFRP42898 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms