Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
USP8P40818 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
USP8P40818 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.5■■□□□ 1.03
USP8P40818 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.5■■□□□ 1.03
USP8P40818 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.5■■□□□ 1.03
USP8P40818 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.5■■□□□ 1.03
USP8P40818 AC083906.2-201ENST00000511578 360 ntBASIC21.5■■□□□ 1.03
USP8P40818 C2orf69P4-201ENST00000565394 541 ntBASIC21.5■■□□□ 1.03
USP8P40818 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.5■■□□□ 1.03
USP8P40818 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
USP8P40818 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
USP8P40818 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.5■■□□□ 1.03
USP8P40818 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
USP8P40818 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 AC087289.5-201ENST00000586076 3175 ntBASIC21.5■■□□□ 1.03
USP8P40818 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
USP8P40818 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP8P40818 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.49■■□□□ 1.03
USP8P40818 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.49■■□□□ 1.03
USP8P40818 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.49■■□□□ 1.03
USP8P40818 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.49■■□□□ 1.03
USP8P40818 PTBP1P-201ENST00000554374 1601 ntBASIC21.49■■□□□ 1.03
USP8P40818 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
USP8P40818 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.49■■□□□ 1.03
USP8P40818 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.49■■□□□ 1.03
USP8P40818 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.49■■□□□ 1.03
USP8P40818 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.49■■□□□ 1.03
USP8P40818 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
USP8P40818 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.49■■□□□ 1.03
USP8P40818 AL121832.2-201ENST00000610979 668 ntBASIC21.49■■□□□ 1.03
USP8P40818 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.49■■□□□ 1.03
USP8P40818 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
USP8P40818 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
USP8P40818 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP8P40818 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.49■■□□□ 1.03
USP8P40818 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.49■■□□□ 1.03
USP8P40818 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 KRT8P17-201ENST00000453110 1448 ntBASIC21.48■■□□□ 1.03
USP8P40818 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
USP8P40818 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.48■■□□□ 1.03
USP8P40818 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.48■■□□□ 1.03
USP8P40818 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.48■■□□□ 1.03
USP8P40818 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.48■■□□□ 1.03
USP8P40818 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
USP8P40818 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.48■■□□□ 1.03
USP8P40818 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
USP8P40818 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.48■■□□□ 1.03
USP8P40818 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
USP8P40818 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP8P40818 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.48■■□□□ 1.03
USP8P40818 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.47■■□□□ 1.03
USP8P40818 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
USP8P40818 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.47■■□□□ 1.03
USP8P40818 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.47■■□□□ 1.03
USP8P40818 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
USP8P40818 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
USP8P40818 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.47■■□□□ 1.03
USP8P40818 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
USP8P40818 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.47■■□□□ 1.03
USP8P40818 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
USP8P40818 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.47■■□□□ 1.03
USP8P40818 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.47■■□□□ 1.03
USP8P40818 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
USP8P40818 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.47■■□□□ 1.03
USP8P40818 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.47■■□□□ 1.03
USP8P40818 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP8P40818 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms