Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.81■□□□□ 0.92
PCK1P35558 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 TSPY6P-201ENST00000448518 926 ntBASIC20.81■□□□□ 0.92
PCK1P35558 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.81■□□□□ 0.92
PCK1P35558 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCK1P35558 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCK1P35558 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCK1P35558 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.81■□□□□ 0.92
PCK1P35558 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCK1P35558 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.81■□□□□ 0.92
PCK1P35558 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.8■□□□□ 0.92
PCK1P35558 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCK1P35558 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.8■□□□□ 0.92
PCK1P35558 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.8■□□□□ 0.92
PCK1P35558 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.8■□□□□ 0.92
PCK1P35558 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
PCK1P35558 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCK1P35558 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.8■□□□□ 0.92
PCK1P35558 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PCK1P35558 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCK1P35558 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.79■□□□□ 0.92
PCK1P35558 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCK1P35558 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.79■□□□□ 0.92
PCK1P35558 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.79■□□□□ 0.92
PCK1P35558 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.79■□□□□ 0.92
PCK1P35558 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.79■□□□□ 0.92
PCK1P35558 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.79■□□□□ 0.92
PCK1P35558 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.79■□□□□ 0.92
PCK1P35558 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.79■□□□□ 0.92
PCK1P35558 AC009237.14-201ENST00000609975 1594 ntBASIC20.79■□□□□ 0.92
PCK1P35558 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCK1P35558 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.79■□□□□ 0.92
PCK1P35558 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCK1P35558 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCK1P35558 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 SLC29A4P1-201ENST00000398760 971 ntBASIC20.78■□□□□ 0.92
PCK1P35558 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.78■□□□□ 0.92
PCK1P35558 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCK1P35558 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.78■□□□□ 0.92
PCK1P35558 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.78■□□□□ 0.92
PCK1P35558 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.78■□□□□ 0.92
PCK1P35558 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCK1P35558 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCK1P35558 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.77■□□□□ 0.92
PCK1P35558 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.77■□□□□ 0.92
PCK1P35558 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.77■□□□□ 0.92
PCK1P35558 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.77■□□□□ 0.92
PCK1P35558 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.77■□□□□ 0.92
PCK1P35558 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.77■□□□□ 0.92
PCK1P35558 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.77■□□□□ 0.92
PCK1P35558 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.77■□□□□ 0.92
PCK1P35558 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms