Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
COL8A2P25067 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL8A2P25067 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL8A2P25067 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.73■□□□□ 0.27
COL8A2P25067 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 AC012618.2-201ENST00000428058 849 ntBASIC16.73■□□□□ 0.27
COL8A2P25067 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.73■□□□□ 0.27
COL8A2P25067 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL8A2P25067 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.73■□□□□ 0.27
COL8A2P25067 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.73■□□□□ 0.27
COL8A2P25067 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.73■□□□□ 0.27
COL8A2P25067 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL8A2P25067 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL8A2P25067 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
COL8A2P25067 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COL8A2P25067 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL8A2P25067 PCDHAC2-203ENST00000615316 3011 ntBASIC16.72■□□□□ 0.27
COL8A2P25067 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.72■□□□□ 0.27
COL8A2P25067 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.72■□□□□ 0.27
COL8A2P25067 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL8A2P25067 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.72■□□□□ 0.27
COL8A2P25067 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 TSPY7P-201ENST00000431358 1114 ntBASIC16.72■□□□□ 0.27
COL8A2P25067 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 KRT16P5-201ENST00000455284 522 ntBASIC16.72■□□□□ 0.27
COL8A2P25067 RARRES2P10-201ENST00000564312 460 ntBASIC16.72■□□□□ 0.27
COL8A2P25067 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.72■□□□□ 0.27
COL8A2P25067 AL049637.2-201ENST00000641778 930 ntBASIC16.72■□□□□ 0.27
COL8A2P25067 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COL8A2P25067 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL8A2P25067 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.71■□□□□ 0.27
COL8A2P25067 KRT16P6-202ENST00000425692 1426 ntBASIC16.71■□□□□ 0.27
COL8A2P25067 AL135905.2-201ENST00000584934 1404 ntBASIC16.71■□□□□ 0.27
COL8A2P25067 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
COL8A2P25067 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.71■□□□□ 0.27
COL8A2P25067 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.71■□□□□ 0.27
COL8A2P25067 AL391422.3-201ENST00000603791 2761 ntBASIC16.71■□□□□ 0.27
COL8A2P25067 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
COL8A2P25067 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL8A2P25067 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
COL8A2P25067 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.71■□□□□ 0.27
COL8A2P25067 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.71■□□□□ 0.27
COL8A2P25067 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.71■□□□□ 0.27
COL8A2P25067 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.71■□□□□ 0.27
COL8A2P25067 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL8A2P25067 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL8A2P25067 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.71■□□□□ 0.27
COL8A2P25067 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.71■□□□□ 0.27
COL8A2P25067 AP001412.1-201ENST00000608405 714 ntBASIC16.71■□□□□ 0.27
COL8A2P25067 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.71■□□□□ 0.27
COL8A2P25067 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL8A2P25067 LINC01006-201ENST00000333319 2292 ntBASIC16.71■□□□□ 0.27
COL8A2P25067 AC092667.1-201ENST00000434301 2586 ntBASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms