Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NR4A1P22736 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.32■□□□□ 0.52
NR4A1P22736 EEF1DP3-203ENST00000566025 782 ntBASIC18.32■□□□□ 0.52
NR4A1P22736 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NR4A1P22736 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NR4A1P22736 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NR4A1P22736 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NR4A1P22736 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR4A1P22736 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.31■□□□□ 0.52
NR4A1P22736 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.31■□□□□ 0.52
NR4A1P22736 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.31■□□□□ 0.52
NR4A1P22736 AC137761.2-201ENST00000561729 223 ntBASIC18.31■□□□□ 0.52
NR4A1P22736 AC145350.3-201ENST00000569033 163 ntBASIC18.31■□□□□ 0.52
NR4A1P22736 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.31■□□□□ 0.52
NR4A1P22736 AC053503.5-201ENST00000601508 636 ntBASIC18.31■□□□□ 0.52
NR4A1P22736 IKBKGP1-201ENST00000612193 1073 ntBASIC18.31■□□□□ 0.52
NR4A1P22736 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NR4A1P22736 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.31■□□□□ 0.52
NR4A1P22736 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NR4A1P22736 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NR4A1P22736 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR4A1P22736 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 AL049812.1-201ENST00000432563 2267 ntBASIC18.3■□□□□ 0.52
NR4A1P22736 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.3■□□□□ 0.52
NR4A1P22736 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.3■□□□□ 0.52
NR4A1P22736 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.3■□□□□ 0.52
NR4A1P22736 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.3■□□□□ 0.52
NR4A1P22736 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.3■□□□□ 0.52
NR4A1P22736 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.3■□□□□ 0.52
NR4A1P22736 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
NR4A1P22736 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR4A1P22736 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.3■□□□□ 0.52
NR4A1P22736 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
NR4A1P22736 AC018470.1-201ENST00000624790 3129 ntBASIC18.29■□□□□ 0.52
NR4A1P22736 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.29■□□□□ 0.52
NR4A1P22736 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.29■□□□□ 0.52
NR4A1P22736 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.29■□□□□ 0.52
NR4A1P22736 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.29■□□□□ 0.52
NR4A1P22736 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.29■□□□□ 0.52
NR4A1P22736 AC138907.5-202ENST00000569484 235 ntBASIC18.29■□□□□ 0.52
NR4A1P22736 AL137784.2-201ENST00000607332 1000 ntBASIC18.29■□□□□ 0.52
NR4A1P22736 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.29■□□□□ 0.52
NR4A1P22736 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR4A1P22736 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.29■□□□□ 0.52
NR4A1P22736 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
NR4A1P22736 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms