Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYN1P17600 PRSS44-201ENST00000515154 1146 ntBASIC21.67■■□□□ 1.06
SYN1P17600 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
SYN1P17600 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYN1P17600 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.67■■□□□ 1.06
SYN1P17600 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.67■■□□□ 1.06
SYN1P17600 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.67■■□□□ 1.06
SYN1P17600 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SYN1P17600 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SYN1P17600 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.66■■□□□ 1.06
SYN1P17600 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.66■■□□□ 1.06
SYN1P17600 PTBP1P-201ENST00000554374 1601 ntBASIC21.66■■□□□ 1.06
SYN1P17600 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SYN1P17600 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SYN1P17600 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.66■■□□□ 1.06
SYN1P17600 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SYN1P17600 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.66■■□□□ 1.06
SYN1P17600 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SYN1P17600 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.66■■□□□ 1.06
SYN1P17600 AL845331.1-201ENST00000424978 1190 ntBASIC21.66■■□□□ 1.06
SYN1P17600 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.66■■□□□ 1.06
SYN1P17600 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SYN1P17600 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.66■■□□□ 1.06
SYN1P17600 AC023511.2-201ENST00000618803 211 ntBASIC21.66■■□□□ 1.06
SYN1P17600 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SYN1P17600 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYN1P17600 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYN1P17600 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.65■■□□□ 1.06
SYN1P17600 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SYN1P17600 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYN1P17600 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.65■■□□□ 1.06
SYN1P17600 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SYN1P17600 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.65■■□□□ 1.06
SYN1P17600 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.65■■□□□ 1.06
SYN1P17600 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.65■■□□□ 1.06
SYN1P17600 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.65■■□□□ 1.06
SYN1P17600 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.65■■□□□ 1.06
SYN1P17600 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.65■■□□□ 1.06
SYN1P17600 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SYN1P17600 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SYN1P17600 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYN1P17600 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SYN1P17600 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.65■■□□□ 1.06
SYN1P17600 KRT8P20-201ENST00000423953 1409 ntBASIC21.64■■□□□ 1.06
SYN1P17600 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.64■■□□□ 1.06
SYN1P17600 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYN1P17600 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYN1P17600 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYN1P17600 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.64■■□□□ 1.05
SYN1P17600 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 AP000593.1-201ENST00000393668 712 ntBASIC21.64■■□□□ 1.05
SYN1P17600 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.64■■□□□ 1.05
SYN1P17600 AL136038.3-201ENST00000561909 1096 ntBASIC21.64■■□□□ 1.05
SYN1P17600 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.64■■□□□ 1.05
SYN1P17600 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYN1P17600 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.64■■□□□ 1.05
SYN1P17600 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 AC096733.2-201ENST00000609937 1394 ntBASIC21.63■■□□□ 1.05
SYN1P17600 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.63■■□□□ 1.05
SYN1P17600 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SYN1P17600 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 AC004951.3-201ENST00000418645 1148 ntBASIC21.63■■□□□ 1.05
SYN1P17600 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.63■■□□□ 1.05
SYN1P17600 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
SYN1P17600 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
SYN1P17600 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.63■■□□□ 1.05
SYN1P17600 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.63■■□□□ 1.05
SYN1P17600 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SYN1P17600 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SYN1P17600 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.63■■□□□ 1.05
SYN1P17600 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYN1P17600 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.62■■□□□ 1.05
SYN1P17600 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SYN1P17600 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYN1P17600 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms