Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC130P13994 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC130P13994 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21■□□□□ 0.95
CCDC130P13994 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21■□□□□ 0.95
CCDC130P13994 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 KRASP1-201ENST00000407852 552 ntBASIC21■□□□□ 0.95
CCDC130P13994 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21■□□□□ 0.95
CCDC130P13994 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21■□□□□ 0.95
CCDC130P13994 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21■□□□□ 0.95
CCDC130P13994 MAX-217ENST00000557277 728 ntTSL 3 BASIC21■□□□□ 0.95
CCDC130P13994 AC124016.1-201ENST00000609552 612 ntBASIC21■□□□□ 0.95
CCDC130P13994 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 AC116351.2-201ENST00000606540 1585 ntBASIC21■□□□□ 0.95
CCDC130P13994 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CCDC130P13994 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CCDC130P13994 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21■□□□□ 0.95
CCDC130P13994 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC130P13994 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC130P13994 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC130P13994 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC130P13994 PCDHAC2-203ENST00000615316 3011 ntBASIC20.99■□□□□ 0.95
CCDC130P13994 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC130P13994 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC130P13994 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC130P13994 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC130P13994 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC130P13994 PRKY-204ENST00000533551 1019 ntBASIC20.99■□□□□ 0.95
CCDC130P13994 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC130P13994 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC130P13994 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC130P13994 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC130P13994 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC130P13994 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC130P13994 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC130P13994 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC130P13994 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC130P13994 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC130P13994 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC130P13994 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC130P13994 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC130P13994 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC130P13994 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC130P13994 FAM197Y4-202ENST00000622692 608 ntBASIC20.98■□□□□ 0.95
CCDC130P13994 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CCDC130P13994 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC130P13994 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC130P13994 TCF3P1-201ENST00000423021 1937 ntBASIC20.98■□□□□ 0.95
CCDC130P13994 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC130P13994 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC130P13994 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC130P13994 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC130P13994 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC130P13994 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC130P13994 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC130P13994 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC130P13994 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CCDC130P13994 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC130P13994 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC130P13994 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC130P13994 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC130P13994 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC130P13994 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC130P13994 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC130P13994 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC130P13994 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CCDC130P13994 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC130P13994 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC130P13994 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC130P13994 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC130P13994 TFP1-202ENST00000475455 1573 ntBASIC20.96■□□□□ 0.95
CCDC130P13994 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms