Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.3■□□□□ 0.52
PEPDP12955 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.3■□□□□ 0.52
PEPDP12955 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.3■□□□□ 0.52
PEPDP12955 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.3■□□□□ 0.52
PEPDP12955 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.29■□□□□ 0.52
PEPDP12955 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.29■□□□□ 0.52
PEPDP12955 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.29■□□□□ 0.52
PEPDP12955 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.29■□□□□ 0.52
PEPDP12955 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.29■□□□□ 0.52
PEPDP12955 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.29■□□□□ 0.52
PEPDP12955 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.29■□□□□ 0.52
PEPDP12955 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 HLA-B-256ENST00000639848 1089 ntBASIC18.29■□□□□ 0.52
PEPDP12955 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.29■□□□□ 0.52
PEPDP12955 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PEPDP12955 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PEPDP12955 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.29■□□□□ 0.52
PEPDP12955 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.29■□□□□ 0.52
PEPDP12955 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.29■□□□□ 0.52
PEPDP12955 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEPDP12955 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.28■□□□□ 0.52
PEPDP12955 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PEPDP12955 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.28■□□□□ 0.52
PEPDP12955 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PEPDP12955 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEPDP12955 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
PEPDP12955 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PEPDP12955 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PEPDP12955 AC060766.5-201ENST00000590539 871 ntBASIC18.28■□□□□ 0.52
PEPDP12955 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.28■□□□□ 0.52
PEPDP12955 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.28■□□□□ 0.52
PEPDP12955 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PEPDP12955 SMG8-203ENST00000578922 2178 ntBASIC18.28■□□□□ 0.52
PEPDP12955 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PEPDP12955 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEPDP12955 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEPDP12955 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.28■□□□□ 0.52
PEPDP12955 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PEPDP12955 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PEPDP12955 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PEPDP12955 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEPDP12955 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PEPDP12955 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PEPDP12955 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEPDP12955 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PEPDP12955 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEPDP12955 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.27■□□□□ 0.52
PEPDP12955 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
PEPDP12955 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEPDP12955 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.27■□□□□ 0.52
PEPDP12955 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.27■□□□□ 0.52
PEPDP12955 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PEPDP12955 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PEPDP12955 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PEPDP12955 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PEPDP12955 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PEPDP12955 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PEPDP12955 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PEPDP12955 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PEPDP12955 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.26■□□□□ 0.51
PEPDP12955 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.26■□□□□ 0.51
PEPDP12955 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
PEPDP12955 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
PEPDP12955 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.26■□□□□ 0.51
PEPDP12955 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PEPDP12955 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PEPDP12955 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.26■□□□□ 0.51
PEPDP12955 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.26■□□□□ 0.51
PEPDP12955 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.26■□□□□ 0.51
PEPDP12955 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PEPDP12955 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
PEPDP12955 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PEPDP12955 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms