Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
KRT3P12035 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 PHGDH-210ENST00000641115 1638 ntBASIC20.86■□□□□ 0.93
KRT3P12035 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KRT3P12035 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.86■□□□□ 0.93
KRT3P12035 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.86■□□□□ 0.93
KRT3P12035 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KRT3P12035 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT3P12035 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KRT3P12035 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT3P12035 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.85■□□□□ 0.93
KRT3P12035 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT3P12035 AP001271.2-201ENST00000624018 1556 ntBASIC20.85■□□□□ 0.93
KRT3P12035 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT3P12035 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT3P12035 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT3P12035 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT3P12035 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.85■□□□□ 0.93
KRT3P12035 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 AC083880.1-201ENST00000608266 535 ntBASIC20.85■□□□□ 0.93
KRT3P12035 HLA-B-256ENST00000639848 1089 ntBASIC20.85■□□□□ 0.93
KRT3P12035 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
KRT3P12035 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
KRT3P12035 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT3P12035 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT3P12035 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
KRT3P12035 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT3P12035 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.84■□□□□ 0.93
KRT3P12035 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
KRT3P12035 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 AC092368.3-202ENST00000574180 1591 ntBASIC20.84■□□□□ 0.93
KRT3P12035 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT3P12035 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT3P12035 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
KRT3P12035 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRT3P12035 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT3P12035 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT3P12035 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT3P12035 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT3P12035 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT3P12035 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT3P12035 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT3P12035 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
KRT3P12035 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT3P12035 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT3P12035 ID1-201ENST00000376105 1233 ntBASIC20.83■□□□□ 0.93
KRT3P12035 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT3P12035 AL355802.2-201ENST00000402069 882 ntBASIC20.83■□□□□ 0.93
KRT3P12035 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
KRT3P12035 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT3P12035 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT3P12035 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.83■□□□□ 0.93
KRT3P12035 AC006557.6-201ENST00000623071 864 ntBASIC20.83■□□□□ 0.93
KRT3P12035 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT3P12035 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT3P12035 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT3P12035 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT3P12035 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT3P12035 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT3P12035 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms