Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSF1P09603 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CSF1P09603 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CSF1P09603 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CSF1P09603 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSF1P09603 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CSF1P09603 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.07■□□□□ 0.32
CSF1P09603 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CSF1P09603 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.07■□□□□ 0.32
CSF1P09603 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CSF1P09603 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.07■□□□□ 0.32
CSF1P09603 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.07■□□□□ 0.32
CSF1P09603 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.07■□□□□ 0.32
CSF1P09603 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CSF1P09603 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSF1P09603 AC026471.1-201ENST00000564629 3026 ntBASIC17.07■□□□□ 0.32
CSF1P09603 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.07■□□□□ 0.32
CSF1P09603 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.07■□□□□ 0.32
CSF1P09603 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 LETM1P2-201ENST00000597330 2178 ntBASIC17.06■□□□□ 0.32
CSF1P09603 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.06■□□□□ 0.32
CSF1P09603 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CSF1P09603 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.06■□□□□ 0.32
CSF1P09603 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.06■□□□□ 0.32
CSF1P09603 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.06■□□□□ 0.32
CSF1P09603 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSF1P09603 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CSF1P09603 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.06■□□□□ 0.32
CSF1P09603 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSF1P09603 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.06■□□□□ 0.32
CSF1P09603 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.06■□□□□ 0.32
CSF1P09603 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CSF1P09603 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CSF1P09603 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.05■□□□□ 0.32
CSF1P09603 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CSF1P09603 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.05■□□□□ 0.32
CSF1P09603 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CSF1P09603 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSF1P09603 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.05■□□□□ 0.32
CSF1P09603 AC245052.3-201ENST00000450182 901 ntBASIC17.05■□□□□ 0.32
CSF1P09603 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.05■□□□□ 0.32
CSF1P09603 AC020763.4-201ENST00000623414 4170 ntBASIC17.05■□□□□ 0.32
CSF1P09603 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSF1P09603 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.05■□□□□ 0.32
CSF1P09603 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSF1P09603 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSF1P09603 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CSF1P09603 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.04■□□□□ 0.32
CSF1P09603 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSF1P09603 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms