Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MMP2P08253 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.98■□□□□ 0.79
MMP2P08253 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.98■□□□□ 0.79
MMP2P08253 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.98■□□□□ 0.79
MMP2P08253 AC233263.1-201ENST00000578059 224 ntBASIC19.98■□□□□ 0.79
MMP2P08253 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.98■□□□□ 0.79
MMP2P08253 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
MMP2P08253 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MMP2P08253 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.98■□□□□ 0.79
MMP2P08253 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MMP2P08253 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP2P08253 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
MMP2P08253 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MMP2P08253 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MMP2P08253 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MMP2P08253 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP2P08253 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 ESRRAP1-201ENST00000400596 1257 ntBASIC19.97■□□□□ 0.79
MMP2P08253 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP2P08253 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP2P08253 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MMP2P08253 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
MMP2P08253 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP2P08253 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP2P08253 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP2P08253 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
MMP2P08253 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.96■□□□□ 0.79
MMP2P08253 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.96■□□□□ 0.79
MMP2P08253 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.96■□□□□ 0.79
MMP2P08253 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
MMP2P08253 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.96■□□□□ 0.79
MMP2P08253 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.96■□□□□ 0.79
MMP2P08253 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
MMP2P08253 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
MMP2P08253 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP2P08253 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.96■□□□□ 0.79
MMP2P08253 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.95■□□□□ 0.78
MMP2P08253 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.95■□□□□ 0.78
MMP2P08253 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
MMP2P08253 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MMP2P08253 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP2P08253 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.95■□□□□ 0.78
MMP2P08253 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MMP2P08253 AL121829.2-201ENST00000620908 328 ntBASIC19.95■□□□□ 0.78
MMP2P08253 AL121906.2-201ENST00000621597 723 ntBASIC19.95■□□□□ 0.78
MMP2P08253 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.95■□□□□ 0.78
MMP2P08253 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP2P08253 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP2P08253 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
MMP2P08253 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP2P08253 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP2P08253 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP2P08253 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP2P08253 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP2P08253 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.94■□□□□ 0.78
MMP2P08253 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP2P08253 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 AL158211.5-201ENST00000623583 2518 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms