Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.59■□□□□ 0.89
RHOP08100 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.59■□□□□ 0.89
RHOP08100 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOP08100 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.58■□□□□ 0.89
RHOP08100 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOP08100 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.58■□□□□ 0.89
RHOP08100 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.58■□□□□ 0.89
RHOP08100 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOP08100 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
RHOP08100 AC004980.1-204ENST00000429707 299 ntBASIC20.58■□□□□ 0.89
RHOP08100 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.58■□□□□ 0.89
RHOP08100 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.58■□□□□ 0.89
RHOP08100 B3GAT3P1-201ENST00000471720 806 ntBASIC20.58■□□□□ 0.89
RHOP08100 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.58■□□□□ 0.89
RHOP08100 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RHOP08100 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RHOP08100 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RHOP08100 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RHOP08100 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RHOP08100 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RHOP08100 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.58■□□□□ 0.88
RHOP08100 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.57■□□□□ 0.88
RHOP08100 PHGDH-210ENST00000641115 1638 ntBASIC20.57■□□□□ 0.88
RHOP08100 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.57■□□□□ 0.88
RHOP08100 AC011506.1-201ENST00000474329 610 ntBASIC20.57■□□□□ 0.88
RHOP08100 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
RHOP08100 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.57■□□□□ 0.88
RHOP08100 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RHOP08100 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.57■□□□□ 0.88
RHOP08100 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RHOP08100 AC073508.3-201ENST00000619697 1419 ntBASIC20.57■□□□□ 0.88
RHOP08100 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.57■□□□□ 0.88
RHOP08100 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RHOP08100 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RHOP08100 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.57■□□□□ 0.88
RHOP08100 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOP08100 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.57■□□□□ 0.88
RHOP08100 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.56■□□□□ 0.88
RHOP08100 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.56■□□□□ 0.88
RHOP08100 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.56■□□□□ 0.88
RHOP08100 DGCR10-201ENST00000609839 495 ntBASIC20.56■□□□□ 0.88
RHOP08100 AC131212.4-201ENST00000623606 975 ntBASIC20.56■□□□□ 0.88
RHOP08100 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.56■□□□□ 0.88
RHOP08100 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 LINC00565-201ENST00000562710 2331 ntBASIC20.56■□□□□ 0.88
RHOP08100 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOP08100 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RHOP08100 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOP08100 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOP08100 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RHOP08100 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHOP08100 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOP08100 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.55■□□□□ 0.88
RHOP08100 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.55■□□□□ 0.88
RHOP08100 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.55■□□□□ 0.88
RHOP08100 C2orf69P3-201ENST00000565542 1120 ntBASIC20.55■□□□□ 0.88
RHOP08100 AP005242.2-201ENST00000580065 1175 ntBASIC20.55■□□□□ 0.88
RHOP08100 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.55■□□□□ 0.88
RHOP08100 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOP08100 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.54■□□□□ 0.88
RHOP08100 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOP08100 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RHOP08100 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOP08100 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOP08100 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOP08100 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHOP08100 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RHOP08100 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHOP08100 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.54■□□□□ 0.88
RHOP08100 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOP08100 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHOP08100 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.53■□□□□ 0.88
RHOP08100 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RHOP08100 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RHOP08100 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOP08100 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOP08100 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.53■□□□□ 0.88
RHOP08100 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOP08100 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOP08100 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms