Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL5A2P05997 AC092338.2-201ENST00000568827 1415 ntBASIC26.25■■□□□ 1.79
COL5A2P05997 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC26.24■■□□□ 1.79
COL5A2P05997 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC26.24■■□□□ 1.79
COL5A2P05997 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC26.24■■□□□ 1.79
COL5A2P05997 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
COL5A2P05997 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL5A2P05997 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC26.23■■□□□ 1.79
COL5A2P05997 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.23■■□□□ 1.79
COL5A2P05997 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC26.23■■□□□ 1.79
COL5A2P05997 AC141257.4-201ENST00000634557 245 ntBASIC26.23■■□□□ 1.79
COL5A2P05997 AC136944.6-201ENST00000634818 245 ntBASIC26.23■■□□□ 1.79
COL5A2P05997 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL5A2P05997 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.23■■□□□ 1.79
COL5A2P05997 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.23■■□□□ 1.79
COL5A2P05997 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL5A2P05997 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL5A2P05997 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.23■■□□□ 1.79
COL5A2P05997 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL5A2P05997 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC26.23■■□□□ 1.79
COL5A2P05997 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.23■■□□□ 1.79
COL5A2P05997 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.23■■□□□ 1.79
COL5A2P05997 PCED1CP-201ENST00000419887 785 ntBASIC26.23■■□□□ 1.79
COL5A2P05997 AC092647.4-201ENST00000457211 535 ntBASIC26.23■■□□□ 1.79
COL5A2P05997 CD320-202ENST00000537716 1119 ntTSL 2 BASIC26.23■■□□□ 1.79
COL5A2P05997 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC26.23■■□□□ 1.79
COL5A2P05997 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL5A2P05997 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL5A2P05997 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL5A2P05997 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.22■■□□□ 1.79
COL5A2P05997 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL5A2P05997 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC26.22■■□□□ 1.79
COL5A2P05997 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL5A2P05997 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL5A2P05997 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
COL5A2P05997 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL5A2P05997 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL5A2P05997 Z85996.1-201ENST00000494644 937 ntBASIC26.22■■□□□ 1.79
COL5A2P05997 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC26.22■■□□□ 1.79
COL5A2P05997 DPP3P2-201ENST00000416030 1696 ntBASIC26.21■■□□□ 1.79
COL5A2P05997 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC26.21■■□□□ 1.79
COL5A2P05997 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC26.21■■□□□ 1.79
COL5A2P05997 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC26.21■■□□□ 1.79
COL5A2P05997 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.21■■□□□ 1.79
COL5A2P05997 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.21■■□□□ 1.79
COL5A2P05997 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC26.21■■□□□ 1.79
COL5A2P05997 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.21■■□□□ 1.79
COL5A2P05997 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL5A2P05997 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC26.21■■□□□ 1.79
COL5A2P05997 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL5A2P05997 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL5A2P05997 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL5A2P05997 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL5A2P05997 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.2■■□□□ 1.79
COL5A2P05997 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.2■■□□□ 1.78
COL5A2P05997 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC26.2■■□□□ 1.78
COL5A2P05997 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
COL5A2P05997 AL023803.3-201ENST00000615559 522 ntBASIC26.2■■□□□ 1.78
COL5A2P05997 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
COL5A2P05997 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.2■■□□□ 1.78
COL5A2P05997 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL5A2P05997 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
COL5A2P05997 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL5A2P05997 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL5A2P05997 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL5A2P05997 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
COL5A2P05997 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL5A2P05997 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC26.19■■□□□ 1.78
COL5A2P05997 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL5A2P05997 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL5A2P05997 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC26.19■■□□□ 1.78
COL5A2P05997 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC26.19■■□□□ 1.78
COL5A2P05997 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL5A2P05997 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC26.19■■□□□ 1.78
COL5A2P05997 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.19■■□□□ 1.78
COL5A2P05997 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC26.19■■□□□ 1.78
COL5A2P05997 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL5A2P05997 IER3-202ENST00000376377 1350 ntBASIC26.19■■□□□ 1.78
COL5A2P05997 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.18■■□□□ 1.78
COL5A2P05997 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 TPM4P1-201ENST00000436100 807 ntBASIC26.18■■□□□ 1.78
COL5A2P05997 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms