Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
C4BPAP04003 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C4BPAP04003 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.31■■□□□ 1
C4BPAP04003 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
C4BPAP04003 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.3■■□□□ 1
C4BPAP04003 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.3■■□□□ 1
C4BPAP04003 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.3■■□□□ 1
C4BPAP04003 MTDHP1-201ENST00000605323 784 ntBASIC21.3■■□□□ 1
C4BPAP04003 AC006058.3-201ENST00000606217 1069 ntBASIC21.3■■□□□ 1
C4BPAP04003 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 AC073648.6-201ENST00000641589 218 ntBASIC21.3■■□□□ 1
C4BPAP04003 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C4BPAP04003 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.3■■□□□ 1
C4BPAP04003 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
C4BPAP04003 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.29■■□□□ 1
C4BPAP04003 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.29■■□□□ 1
C4BPAP04003 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.29■■□□□ 1
C4BPAP04003 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
C4BPAP04003 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.29■■□□□ 1
C4BPAP04003 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.29■■□□□ 1
C4BPAP04003 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.29■■□□□ 1
C4BPAP04003 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C4BPAP04003 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.29■■□□□ 1
C4BPAP04003 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.29■■□□□ 1
C4BPAP04003 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
C4BPAP04003 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.28■■□□□ 1
C4BPAP04003 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.28■■□□□ 1
C4BPAP04003 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
C4BPAP04003 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 AC128676.1-201ENST00000454392 318 ntBASIC21.28■■□□□ 1
C4BPAP04003 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.28■■□□□ 1
C4BPAP04003 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
C4BPAP04003 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.28■■□□□ 1
C4BPAP04003 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C4BPAP04003 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.28■■□□□ 1
C4BPAP04003 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
C4BPAP04003 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.28■■□□□ 1
C4BPAP04003 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C4BPAP04003 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.27■■□□□ 1
C4BPAP04003 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C4BPAP04003 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.27■■□□□ 1
C4BPAP04003 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.27■■□□□ 1
C4BPAP04003 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
C4BPAP04003 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.27■■□□□ 1
C4BPAP04003 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.27■■□□□ 1
C4BPAP04003 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.27■■□□□ 1
C4BPAP04003 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
C4BPAP04003 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
C4BPAP04003 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
C4BPAP04003 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C4BPAP04003 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
C4BPAP04003 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
C4BPAP04003 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
C4BPAP04003 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C4BPAP04003 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C4BPAP04003 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C4BPAP04003 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
C4BPAP04003 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C4BPAP04003 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C4BPAP04003 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
C4BPAP04003 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms