Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNOT4O95628 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CNOT4O95628 PRKY-204ENST00000533551 1019 ntBASIC17.57■□□□□ 0.4
CNOT4O95628 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CNOT4O95628 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.57■□□□□ 0.4
CNOT4O95628 AL359736.2-201ENST00000621992 437 ntBASIC17.57■□□□□ 0.4
CNOT4O95628 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT4O95628 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT4O95628 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CNOT4O95628 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT4O95628 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT4O95628 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT4O95628 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CNOT4O95628 MIR718-201ENST00000390190 70 ntBASIC17.56■□□□□ 0.4
CNOT4O95628 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT4O95628 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT4O95628 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.56■□□□□ 0.4
CNOT4O95628 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT4O95628 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT4O95628 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT4O95628 FAM197Y4-202ENST00000622692 608 ntBASIC17.56■□□□□ 0.4
CNOT4O95628 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CNOT4O95628 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT4O95628 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT4O95628 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CNOT4O95628 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNOT4O95628 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT4O95628 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CNOT4O95628 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT4O95628 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 AC133681.1-201ENST00000465482 601 ntBASIC17.55■□□□□ 0.4
CNOT4O95628 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT4O95628 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT4O95628 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
CNOT4O95628 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 AC073130.3-201ENST00000624389 2278 ntBASIC17.55■□□□□ 0.4
CNOT4O95628 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT4O95628 AC020907.5-201ENST00000624372 1936 ntBASIC17.55■□□□□ 0.4
CNOT4O95628 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.54■□□□□ 0.4
CNOT4O95628 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CNOT4O95628 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNOT4O95628 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CNOT4O95628 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CNOT4O95628 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNOT4O95628 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT4O95628 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT4O95628 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT4O95628 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.54■□□□□ 0.4
CNOT4O95628 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT4O95628 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT4O95628 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNOT4O95628 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNOT4O95628 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms