Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
DKK1O94907 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19■□□□□ 0.63
DKK1O94907 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19■□□□□ 0.63
DKK1O94907 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DKK1O94907 AP006587.1-201ENST00000534129 1502 ntBASIC19■□□□□ 0.63
DKK1O94907 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DKK1O94907 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19■□□□□ 0.63
DKK1O94907 AL024507.2-201ENST00000606070 2574 ntBASIC18.99■□□□□ 0.63
DKK1O94907 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.99■□□□□ 0.63
DKK1O94907 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
DKK1O94907 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.99■□□□□ 0.63
DKK1O94907 TSPY5P-201ENST00000426936 936 ntBASIC18.99■□□□□ 0.63
DKK1O94907 TPM4P1-201ENST00000436100 807 ntBASIC18.99■□□□□ 0.63
DKK1O94907 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DKK1O94907 YBX1P2-201ENST00000489612 999 ntBASIC18.99■□□□□ 0.63
DKK1O94907 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 AC131212.4-201ENST00000623606 975 ntBASIC18.99■□□□□ 0.63
DKK1O94907 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DKK1O94907 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DKK1O94907 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DKK1O94907 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.99■□□□□ 0.63
DKK1O94907 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
DKK1O94907 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
DKK1O94907 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
DKK1O94907 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DKK1O94907 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.98■□□□□ 0.63
DKK1O94907 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 KRT18P48-201ENST00000434763 852 ntBASIC18.98■□□□□ 0.63
DKK1O94907 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.98■□□□□ 0.63
DKK1O94907 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.98■□□□□ 0.63
DKK1O94907 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
DKK1O94907 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.98■□□□□ 0.63
DKK1O94907 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.98■□□□□ 0.63
DKK1O94907 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.98■□□□□ 0.63
DKK1O94907 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DKK1O94907 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
DKK1O94907 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.97■□□□□ 0.63
DKK1O94907 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DKK1O94907 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 AC096733.2-201ENST00000609937 1394 ntBASIC18.97■□□□□ 0.63
DKK1O94907 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.97■□□□□ 0.63
DKK1O94907 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 KRT18P16-201ENST00000510337 1294 ntBASIC18.97■□□□□ 0.63
DKK1O94907 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.97■□□□□ 0.63
DKK1O94907 AL121956.5-201ENST00000625261 221 ntBASIC18.97■□□□□ 0.63
DKK1O94907 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.97■□□□□ 0.63
DKK1O94907 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
DKK1O94907 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
DKK1O94907 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
DKK1O94907 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.97■□□□□ 0.63
DKK1O94907 FEM1AP4-201ENST00000443167 1987 ntBASIC18.97■□□□□ 0.63
DKK1O94907 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DKK1O94907 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.96■□□□□ 0.63
DKK1O94907 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DKK1O94907 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DKK1O94907 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DKK1O94907 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DKK1O94907 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DKK1O94907 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DKK1O94907 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
DKK1O94907 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
DKK1O94907 YBX1P10-201ENST00000444752 975 ntBASIC18.96■□□□□ 0.63
DKK1O94907 FAM86EP-206ENST00000510506 987 ntBASIC18.96■□□□□ 0.63
DKK1O94907 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.96■□□□□ 0.63
DKK1O94907 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
DKK1O94907 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.96■□□□□ 0.63
DKK1O94907 AC010653.2-201ENST00000623505 997 ntBASIC18.96■□□□□ 0.63
DKK1O94907 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.96■□□□□ 0.63
DKK1O94907 AC116562.4-202ENST00000641738 218 ntBASIC18.96■□□□□ 0.63
DKK1O94907 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DKK1O94907 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DKK1O94907 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.96■□□□□ 0.63
DKK1O94907 AL049796.1-201ENST00000565336 1766 ntBASIC18.96■□□□□ 0.63
DKK1O94907 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms