Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
OPHN1O60890 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.62■□□□□ 0.89
OPHN1O60890 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.62■□□□□ 0.89
OPHN1O60890 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.62■□□□□ 0.89
OPHN1O60890 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.62■□□□□ 0.89
OPHN1O60890 AL359736.2-201ENST00000621992 437 ntBASIC20.62■□□□□ 0.89
OPHN1O60890 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.62■□□□□ 0.89
OPHN1O60890 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
OPHN1O60890 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 TCF3P1-201ENST00000423021 1937 ntBASIC20.62■□□□□ 0.89
OPHN1O60890 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
OPHN1O60890 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.62■□□□□ 0.89
OPHN1O60890 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
OPHN1O60890 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.61■□□□□ 0.89
OPHN1O60890 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
OPHN1O60890 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.61■□□□□ 0.89
OPHN1O60890 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
OPHN1O60890 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
OPHN1O60890 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.61■□□□□ 0.89
OPHN1O60890 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
OPHN1O60890 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.61■□□□□ 0.89
OPHN1O60890 FAM197Y4-202ENST00000622692 608 ntBASIC20.61■□□□□ 0.89
OPHN1O60890 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.61■□□□□ 0.89
OPHN1O60890 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
OPHN1O60890 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.61■□□□□ 0.89
OPHN1O60890 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
OPHN1O60890 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPHN1O60890 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
OPHN1O60890 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPHN1O60890 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
OPHN1O60890 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.6■□□□□ 0.89
OPHN1O60890 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.6■□□□□ 0.89
OPHN1O60890 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
OPHN1O60890 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
OPHN1O60890 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.6■□□□□ 0.89
OPHN1O60890 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPHN1O60890 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.6■□□□□ 0.89
OPHN1O60890 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
OPHN1O60890 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
OPHN1O60890 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
OPHN1O60890 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.6■□□□□ 0.89
OPHN1O60890 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.6■□□□□ 0.89
OPHN1O60890 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.6■□□□□ 0.89
OPHN1O60890 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
OPHN1O60890 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPHN1O60890 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPHN1O60890 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
OPHN1O60890 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
OPHN1O60890 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
OPHN1O60890 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.59■□□□□ 0.89
OPHN1O60890 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.59■□□□□ 0.89
OPHN1O60890 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.59■□□□□ 0.89
OPHN1O60890 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 PCDHAC2-203ENST00000615316 3011 ntBASIC20.59■□□□□ 0.89
OPHN1O60890 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.59■□□□□ 0.89
OPHN1O60890 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
OPHN1O60890 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.59■□□□□ 0.89
OPHN1O60890 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms