Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AFG3L1P-217ENST00000557444 2447 ntBASIC18.48■□□□□ 0.55
HCN1O60741 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HCN1O60741 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 PCDHAC2-203ENST00000615316 3011 ntBASIC18.47■□□□□ 0.55
HCN1O60741 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HCN1O60741 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.47■□□□□ 0.55
HCN1O60741 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.47■□□□□ 0.55
HCN1O60741 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.47■□□□□ 0.55
HCN1O60741 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCN1O60741 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HCN1O60741 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.46■□□□□ 0.55
HCN1O60741 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.46■□□□□ 0.55
HCN1O60741 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.46■□□□□ 0.55
HCN1O60741 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.46■□□□□ 0.55
HCN1O60741 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.46■□□□□ 0.55
HCN1O60741 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HCN1O60741 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HCN1O60741 AP003097.1-201ENST00000530657 1135 ntBASIC18.46■□□□□ 0.55
HCN1O60741 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.46■□□□□ 0.55
HCN1O60741 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.46■□□□□ 0.55
HCN1O60741 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.46■□□□□ 0.55
HCN1O60741 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCN1O60741 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
HCN1O60741 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.54
HCN1O60741 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.45■□□□□ 0.54
HCN1O60741 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HCN1O60741 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.45■□□□□ 0.54
HCN1O60741 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.45■□□□□ 0.54
HCN1O60741 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.45■□□□□ 0.54
HCN1O60741 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.45■□□□□ 0.54
HCN1O60741 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HCN1O60741 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.45■□□□□ 0.54
HCN1O60741 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCN1O60741 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HCN1O60741 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.45■□□□□ 0.54
HCN1O60741 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.45■□□□□ 0.54
HCN1O60741 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.45■□□□□ 0.54
HCN1O60741 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HCN1O60741 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HCN1O60741 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 PNMA6B-201ENST00000538162 1200 ntBASIC18.44■□□□□ 0.54
HCN1O60741 C2orf69P4-201ENST00000565394 541 ntBASIC18.44■□□□□ 0.54
HCN1O60741 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.44■□□□□ 0.54
HCN1O60741 AC112907.3-201ENST00000577781 2400 ntBASIC18.44■□□□□ 0.54
HCN1O60741 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.44■□□□□ 0.54
HCN1O60741 AC087289.5-201ENST00000586076 3175 ntBASIC18.44■□□□□ 0.54
HCN1O60741 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HCN1O60741 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.44■□□□□ 0.54
HCN1O60741 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 AC092368.3-202ENST00000574180 1591 ntBASIC18.43■□□□□ 0.54
HCN1O60741 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.43■□□□□ 0.54
HCN1O60741 PRORSD1P-201ENST00000295112 541 ntBASIC18.43■□□□□ 0.54
HCN1O60741 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms