Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.21■■□□□ 1.31
CTNND1O60716 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.21■■□□□ 1.31
CTNND1O60716 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.21■■□□□ 1.31
CTNND1O60716 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.21■■□□□ 1.31
CTNND1O60716 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.21■■□□□ 1.31
CTNND1O60716 AC018553.1-201ENST00000616682 1458 ntBASIC23.21■■□□□ 1.31
CTNND1O60716 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.21■■□□□ 1.31
CTNND1O60716 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CTNND1O60716 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTNND1O60716 AC007225.1-201ENST00000566331 1836 ntBASIC23.2■■□□□ 1.3
CTNND1O60716 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTNND1O60716 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CTNND1O60716 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.2■■□□□ 1.3
CTNND1O60716 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.2■■□□□ 1.3
CTNND1O60716 KRT18P57-201ENST00000443599 1254 ntBASIC23.2■■□□□ 1.3
CTNND1O60716 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CTNND1O60716 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.2■■□□□ 1.3
CTNND1O60716 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.2■■□□□ 1.3
CTNND1O60716 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTNND1O60716 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CTNND1O60716 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTNND1O60716 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTNND1O60716 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTNND1O60716 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
CTNND1O60716 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CTNND1O60716 TUBB8P6-201ENST00000436895 1288 ntBASIC23.19■■□□□ 1.3
CTNND1O60716 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.19■■□□□ 1.3
CTNND1O60716 B3GAT3P1-201ENST00000471720 806 ntBASIC23.19■■□□□ 1.3
CTNND1O60716 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.19■■□□□ 1.3
CTNND1O60716 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.19■■□□□ 1.3
CTNND1O60716 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTNND1O60716 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.19■■□□□ 1.3
CTNND1O60716 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.19■■□□□ 1.3
CTNND1O60716 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.18■■□□□ 1.3
CTNND1O60716 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.18■■□□□ 1.3
CTNND1O60716 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.18■■□□□ 1.3
CTNND1O60716 AC004980.1-204ENST00000429707 299 ntBASIC23.18■■□□□ 1.3
CTNND1O60716 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CTNND1O60716 AP005242.2-201ENST00000580065 1175 ntBASIC23.18■■□□□ 1.3
CTNND1O60716 DGCR10-201ENST00000609839 495 ntBASIC23.18■■□□□ 1.3
CTNND1O60716 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTNND1O60716 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.17■■□□□ 1.3
CTNND1O60716 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CTNND1O60716 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.17■■□□□ 1.3
CTNND1O60716 AC011506.1-201ENST00000474329 610 ntBASIC23.17■■□□□ 1.3
CTNND1O60716 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CTNND1O60716 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTNND1O60716 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.17■■□□□ 1.3
CTNND1O60716 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CTNND1O60716 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.16■■□□□ 1.3
CTNND1O60716 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.16■■□□□ 1.3
CTNND1O60716 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.16■■□□□ 1.3
CTNND1O60716 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CTNND1O60716 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.16■■□□□ 1.3
CTNND1O60716 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.16■■□□□ 1.3
CTNND1O60716 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.16■■□□□ 1.3
CTNND1O60716 C2orf69P3-201ENST00000565542 1120 ntBASIC23.16■■□□□ 1.3
CTNND1O60716 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CTNND1O60716 AC131212.4-201ENST00000623606 975 ntBASIC23.16■■□□□ 1.3
CTNND1O60716 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CTNND1O60716 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTNND1O60716 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.15■■□□□ 1.3
CTNND1O60716 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms