Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.27■□□□□ 0.67
HDAC3O15379 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HDAC3O15379 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HDAC3O15379 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HDAC3O15379 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
HDAC3O15379 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HDAC3O15379 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HDAC3O15379 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.26■□□□□ 0.67
HDAC3O15379 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HDAC3O15379 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HDAC3O15379 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HDAC3O15379 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.26■□□□□ 0.67
HDAC3O15379 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.26■□□□□ 0.67
HDAC3O15379 MYCNOS-205ENST00000641950 531 ntBASIC19.26■□□□□ 0.67
HDAC3O15379 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HDAC3O15379 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.26■□□□□ 0.67
HDAC3O15379 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
HDAC3O15379 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
HDAC3O15379 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDAC3O15379 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 KRT8P20-201ENST00000423953 1409 ntBASIC19.25■□□□□ 0.67
HDAC3O15379 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HDAC3O15379 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.25■□□□□ 0.67
HDAC3O15379 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
HDAC3O15379 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HDAC3O15379 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.25■□□□□ 0.67
HDAC3O15379 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.25■□□□□ 0.67
HDAC3O15379 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.25■□□□□ 0.67
HDAC3O15379 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.25■□□□□ 0.67
HDAC3O15379 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
HDAC3O15379 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.25■□□□□ 0.67
HDAC3O15379 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HDAC3O15379 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC3O15379 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
HDAC3O15379 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HDAC3O15379 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HDAC3O15379 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC3O15379 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC3O15379 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC3O15379 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
HDAC3O15379 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HDAC3O15379 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.23■□□□□ 0.67
HDAC3O15379 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.23■□□□□ 0.67
HDAC3O15379 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HDAC3O15379 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 TERF1P5-201ENST00000477545 1207 ntBASIC19.23■□□□□ 0.67
HDAC3O15379 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC3O15379 AL162412.1-201ENST00000567129 965 ntBASIC19.23■□□□□ 0.67
HDAC3O15379 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.23■□□□□ 0.67
HDAC3O15379 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms