Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.21■□□□□ 0.03
NDUFA4O00483 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFA4O00483 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.21■□□□□ 0.03
NDUFA4O00483 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFA4O00483 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFA4O00483 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.21■□□□□ 0.03
NDUFA4O00483 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NDUFA4O00483 PNMA6B-201ENST00000538162 1200 ntBASIC15.21■□□□□ 0.03
NDUFA4O00483 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.21■□□□□ 0.03
NDUFA4O00483 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.21■□□□□ 0.03
NDUFA4O00483 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFA4O00483 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFA4O00483 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFA4O00483 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFA4O00483 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFA4O00483 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.21■□□□□ 0.03
NDUFA4O00483 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NDUFA4O00483 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFA4O00483 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.21■□□□□ 0.02
NDUFA4O00483 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
NDUFA4O00483 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFA4O00483 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.21■□□□□ 0.02
NDUFA4O00483 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFA4O00483 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NDUFA4O00483 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NDUFA4O00483 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.2■□□□□ 0.02
NDUFA4O00483 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.2■□□□□ 0.02
NDUFA4O00483 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.2■□□□□ 0.02
NDUFA4O00483 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.2■□□□□ 0.02
NDUFA4O00483 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFA4O00483 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.2■□□□□ 0.02
NDUFA4O00483 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFA4O00483 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
NDUFA4O00483 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFA4O00483 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFA4O00483 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFA4O00483 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA4O00483 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFA4O00483 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFA4O00483 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFA4O00483 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA4O00483 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA4O00483 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFA4O00483 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFA4O00483 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.19■□□□□ 0.02
NDUFA4O00483 AC006557.6-201ENST00000623071 864 ntBASIC15.19■□□□□ 0.02
NDUFA4O00483 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFA4O00483 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA4O00483 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFA4O00483 AC116351.2-201ENST00000606540 1585 ntBASIC15.19■□□□□ 0.02
NDUFA4O00483 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA4O00483 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFA4O00483 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA4O00483 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFA4O00483 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NDUFA4O00483 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFA4O00483 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFA4O00483 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NDUFA4O00483 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.18■□□□□ 0.02
NDUFA4O00483 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms