Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.89■□□□□ 0.61
RTCAO00442 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.89■□□□□ 0.61
RTCAO00442 TMEM179-206ENST00000616017 1645 ntBASIC18.89■□□□□ 0.61
RTCAO00442 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTCAO00442 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RTCAO00442 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.88■□□□□ 0.61
RTCAO00442 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.88■□□□□ 0.61
RTCAO00442 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.88■□□□□ 0.61
RTCAO00442 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 PHGDH-210ENST00000641115 1638 ntBASIC18.88■□□□□ 0.61
RTCAO00442 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.88■□□□□ 0.61
RTCAO00442 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RTCAO00442 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTCAO00442 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.88■□□□□ 0.61
RTCAO00442 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.87■□□□□ 0.61
RTCAO00442 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RTCAO00442 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RTCAO00442 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.87■□□□□ 0.61
RTCAO00442 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTCAO00442 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.87■□□□□ 0.61
RTCAO00442 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.87■□□□□ 0.61
RTCAO00442 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RTCAO00442 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.87■□□□□ 0.61
RTCAO00442 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RTCAO00442 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RTCAO00442 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.87■□□□□ 0.61
RTCAO00442 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.87■□□□□ 0.61
RTCAO00442 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTCAO00442 AL158211.5-201ENST00000623583 2518 ntBASIC18.87■□□□□ 0.61
RTCAO00442 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.87■□□□□ 0.61
RTCAO00442 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.87■□□□□ 0.61
RTCAO00442 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.87■□□□□ 0.61
RTCAO00442 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTCAO00442 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RTCAO00442 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.86■□□□□ 0.61
RTCAO00442 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.86■□□□□ 0.61
RTCAO00442 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
RTCAO00442 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.86■□□□□ 0.61
RTCAO00442 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.86■□□□□ 0.61
RTCAO00442 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.86■□□□□ 0.61
RTCAO00442 RNA5SP413-201ENST00000516373 109 ntBASIC18.86■□□□□ 0.61
RTCAO00442 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 SOX15-203ENST00000570788 1093 ntBASIC18.86■□□□□ 0.61
RTCAO00442 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.86■□□□□ 0.61
RTCAO00442 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.86■□□□□ 0.61
RTCAO00442 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTCAO00442 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RTCAO00442 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTCAO00442 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTCAO00442 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RTCAO00442 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.85■□□□□ 0.61
RTCAO00442 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms