Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC093503.3-201ENST00000624917 2352 ntBASIC18.3■□□□□ 0.52
TNFRSF11BO00300 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 KRT8P17-201ENST00000453110 1448 ntBASIC18.3■□□□□ 0.52
TNFRSF11BO00300 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 CYP21A1P-202ENST00000354927 1481 ntBASIC18.29■□□□□ 0.52
TNFRSF11BO00300 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 KRT16P6-202ENST00000425692 1426 ntBASIC18.29■□□□□ 0.52
TNFRSF11BO00300 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF11BO00300 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF11BO00300 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 PTBP1P-201ENST00000554374 1601 ntBASIC18.27■□□□□ 0.52
TNFRSF11BO00300 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF11BO00300 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TNFRSF11BO00300 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNFRSF11BO00300 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNFRSF11BO00300 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms