Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 AP000974.1-201ENST00000623909 2387 ntBASIC16.11■□□□□ 0.17
LINC00473A8K010 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00473A8K010 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00473A8K010 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LINC00473A8K010 AC004911.1-201ENST00000416316 871 ntBASIC16.11■□□□□ 0.17
LINC00473A8K010 AL512625.2-201ENST00000417533 625 ntBASIC16.11■□□□□ 0.17
LINC00473A8K010 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LINC00473A8K010 AC022517.1-201ENST00000592429 346 ntBASIC16.11■□□□□ 0.17
LINC00473A8K010 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LINC00473A8K010 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
LINC00473A8K010 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 PHGDH-210ENST00000641115 1638 ntBASIC16.11■□□□□ 0.17
LINC00473A8K010 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LINC00473A8K010 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00473A8K010 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00473A8K010 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00473A8K010 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00473A8K010 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 BX323043.1-201ENST00000641006 1765 ntBASIC16.1■□□□□ 0.17
LINC00473A8K010 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 AC023632.3-201ENST00000521633 145 ntBASIC16.1■□□□□ 0.17
LINC00473A8K010 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.1■□□□□ 0.17
LINC00473A8K010 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.1■□□□□ 0.17
LINC00473A8K010 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.1■□□□□ 0.17
LINC00473A8K010 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 AC005181.1-201ENST00000604782 1256 ntBASIC16.1■□□□□ 0.17
LINC00473A8K010 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00473A8K010 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
LINC00473A8K010 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00473A8K010 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00473A8K010 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.09■□□□□ 0.17
LINC00473A8K010 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00473A8K010 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
LINC00473A8K010 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00473A8K010 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LINC00473A8K010 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.09■□□□□ 0.17
LINC00473A8K010 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00473A8K010 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00473A8K010 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00473A8K010 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00473A8K010 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
LINC00473A8K010 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00473A8K010 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00473A8K010 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.08■□□□□ 0.17
LINC00473A8K010 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00473A8K010 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
LINC00473A8K010 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00473A8K010 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00473A8K010 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms