Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 AC026271.3-201ENST00000571884 352 ntBASIC17.46■□□□□ 0.39
MBD3L3A6NE82 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 AC007375.3-201ENST00000600936 2314 ntBASIC17.46■□□□□ 0.38
MBD3L3A6NE82 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 AC020907.5-201ENST00000624372 1936 ntBASIC17.45■□□□□ 0.38
MBD3L3A6NE82 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 FAM210CP-201ENST00000445714 574 ntBASIC17.45■□□□□ 0.38
MBD3L3A6NE82 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 AL031985.4-201ENST00000642138 673 ntBASIC17.45■□□□□ 0.38
MBD3L3A6NE82 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MBD3L3A6NE82 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 AC079598.2-202ENST00000546624 1451 ntBASIC17.44■□□□□ 0.38
MBD3L3A6NE82 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.44■□□□□ 0.38
MBD3L3A6NE82 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MBD3L3A6NE82 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MBD3L3A6NE82 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 AP000525.1-201ENST00000608286 694 ntBASIC17.42■□□□□ 0.38
MBD3L3A6NE82 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 FSCN1P1-201ENST00000568912 1481 ntBASIC17.42■□□□□ 0.38
MBD3L3A6NE82 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MBD3L3A6NE82 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms