Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC005332.7-201ENST00000614046 2005 ntBASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TRIM49BA6NDI0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM49BA6NDI0 AP001271.2-201ENST00000624018 1556 ntBASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TRIM49BA6NDI0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM49BA6NDI0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 MIPEPP3-201ENST00000412105 444 ntBASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM49BA6NDI0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 GUSBP6-202ENST00000438529 1198 ntBASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 AC083906.2-201ENST00000511578 360 ntBASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM49BA6NDI0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 AC006970.2-201ENST00000450065 779 ntBASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms