Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-1A0A0B4J241 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 TMEM179-206ENST00000616017 1645 ntBASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 AP001160.3-201ENST00000601484 763 ntBASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 AC104187.1-201ENST00000607510 612 ntBASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 FAM21FP-204ENST00000608637 956 ntBASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 KRT8P36-201ENST00000489121 1440 ntBASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 AP000974.1-201ENST00000623909 2387 ntBASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-1A0A0B4J241 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 IRS3P-201ENST00000223076 1006 ntBASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 AC007322.3-201ENST00000426526 701 ntBASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 AC142381.2-201ENST00000566120 298 ntBASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 AL031432.3-201ENST00000607698 485 ntBASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-1A0A0B4J241 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV13-1A0A0B4J241 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV13-1A0A0B4J241 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
TRAV13-1A0A0B4J241 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TRAV13-1A0A0B4J241 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV13-1A0A0B4J241 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV13-1A0A0B4J241 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms