Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PCDHAC2-203ENST00000615316 3011 ntBASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV7-1A0A0A6YYK4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 ID1-201ENST00000376105 1233 ntBASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV7-1A0A0A6YYK4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 AL355802.2-201ENST00000402069 882 ntBASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 HLA-L-209ENST00000420110 1011 ntBASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PNMA6B-201ENST00000538162 1200 ntBASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRBV7-1A0A0A6YYK4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV7-1A0A0A6YYK4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms